Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3672g00002 ATGGAAAGAAGAGATCTTTCTTTCTCCATTTTAGCTTTCTTTGTCTTCTTCTGCACTTCAGTATCTGGTTTGCTTTCTTCTAAAGGCGTCAACAATGAAGTGCAAGCTCTTATTGGCATTAAAAGTTCTTTGAAGGATCCTAACAATGCCCTTCATAACTGGGATATGTATGAAGTGGAGCCTTGTAACTGGGCTTTGGTATCTTGCTTTGGTGGTTCTGTGACTGACCTGGAATTTCCCAGCCAAAACTTTTCTGGCTTTCTTTCCCCAAGCATTAGCAACTTAACCAATCTCAGGAATCTGATCCTGCAAGCTAATAATATATCAGGACCAATTCCTTCTGAGATTTGGAAGCTGCAAAAGCTTCAAACTCTTGATCTTTCTCATAATTCCTTCACTGGTCAACTTCCAGAGAGTCTCTCCCACATGAAGAGTCTCAATTATCTGAGGCTGAACAATAATAGTCTTACAGGACCAATACCTTCCTCTTTGGCTGACATGACCCAGCTTGCTATTCTGGATGTATCCTATAATAACTTGAGTGGACCTCTACCAACAATAAATGCAAAAACTTTCAATATTCTAGGAAATCCCCAGATTTGTGCCACTGGGACTGACCAACAGTGCTTCAGAACAACAGTTTCAACTAATTTTAATAACTCTCAAGGTTCGCCACCCACCAGTAAACCAAAGAATCGCAAACTTGTCTTGGCACTTGCTTTAGCGGTAAGCTGTGTCTCCTTACTAACTCTGGTCTTCGGCTTCCTCTGGTGGAGACAAAGATCAAGCAAACAAGTTTTCTTCGACATTAATGAACAAATGCAAGAAGATGTGCGCCTTGGAAACTTGAGAAAGTTCCACATAAGAGAACTTGAAGTTGCCACGAACAAGTTCAGCAGCAAGAACTTGATTGGCAAAGGAGGATATGGGAATGTGTACAAAGGCTATCTTTCAAATGGTGGGGTCATAGCAGTGAAAAGGCTTAGAGATGGCAGTGCCATTACAGGGGAGATCCAGTTCCAGACTGAAGTGGAGATGATCAGCCTGGCTGTGCATCGCAATTTGCTTCGTCTCTATGGATACTGCATCACTCCTACAGAGAGACTCCTGGTTTATCCCTTCATGTCCAATGGTAGTGTTGCTTCTCGTCTCAAAGCGAAGCCTGCTTTAGAGTGGAGCACAAGGAAGAGGATAGCTTTGGGAGCAGCAAGAGGGTTAGTATACCTACATGAGCAATGTGATCCCAAGATTATTCATAGGGATGTGAAGGCTGCAAATATATTGCTTGATGAGTACTGTGAAGCAGTGGTTGGGGATTTTGGGTTAGCTAAACTATTAGATCACAGGGAATCACATGTCACCACAGCTGTTAGAGGCACTGTAGGCCATATAGCACCAGAGTACCTCTCAACAGGTCAATCTTCTGATAAAACTGATGTCTTTGGCTTTGGGATCCTTCTCCTTGAACTCATCTCTGGCCGCACAGCTCTTGAATTTGGAAAAGCAGCTAACCAGAAAGGAGCCATGCTTGATTGGGTGAAGAAAATGCATCAAGAGAAGAAACTTGACTTGTTGATTGACAAGGACCTTAGAAACAACTATGACAGAATTGAGCTTGAAGAAATGGTTCGAATAGCACTCTTGTGTACCCAGTACGTTCCCGCTCATAGACCCAAAATGTCTGAAGTGGTTAGAATGCTTGAAGGAGATGGTCTTGCAGAGAAATGGGAAGCTTCAAAGGGAGATGAATCAACAAGGGGCAGAGCAAGTGAGCTTTCTTCTTCAGAACGCTACTCTGATCTCACTGATGACTCTACACTGCTTAATCAGGCCATGGAGCTTTCTGGTCCAAGGTGA 1857 0.4313 MERRDLSFSILAFFVFFCTSVSGLLSSKGVNNEVQALIGIKSSLKDPNNALHNWDMYEVEPCNWALVSCFGGSVTDLEFPSQNFSGFLSPSISNLTNLRNLILQANNISGPIPSEIWKLQKLQTLDLSHNSFTGQLPESLSHMKSLNYLRLNNNSLTGPIPSSLADMTQLAILDVSYNNLSGPLPTINAKTFNILGNPQICATGTDQQCFRTTVSTNFNNSQGSPPTSKPKNRKLVLALALAVSCVSLLTLVFGFLWWRQRSSKQVFFDINEQMQEDVRLGNLRKFHIRELEVATNKFSSKNLIGKGGYGNVYKGYLSNGGVIAVKRLRDGSAITGEIQFQTEVEMISLAVHRNLLRLYGYCITPTERLLVYPFMSNGSVASRLKAKPALEWSTRKRIALGAARGLVYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELISGRTALEFGKAANQKGAMLDWVKKMHQEKKLDLLIDKDLRNNYDRIELEEMVRIALLCTQYVPAHRPKMSEVVRMLEGDGLAEKWEASKGDESTRGRASELSSSERYSDLTDDSTLLNQAMELSGPR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3672g00002 618 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Pral3672g00002 618 Pfam Protein kinase domain 299 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3672g00002 618 MobiDBLite consensus disorder prediction 591 612 - -
Pral3672g00002 618 ProSiteProfiles Protein kinase domain profile. 298 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3672g00002 618 SUPERFAMILY L domain-like 31 194 - -
Pral3672g00002 618 FunFam Somatic embryogenesis receptor-like kinase 1 375 587 - -
Pral3672g00002 618 SUPERFAMILY Protein kinase-like (PK-like) 283 569 IPR011009 -
Pral3672g00002 618 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Pral3672g00002 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Pral3672g00002 618 Gene3D Transferase(Phosphotransferase) domain 1 375 587 - -
Pral3672g00002 618 Gene3D Ribonuclease Inhibitor 29 211 IPR032675 -
Pral3672g00002 618 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Pral3672g00002 618 SMART serkin_6 298 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3672g00002 618 MobiDBLite consensus disorder prediction 575 618 - -
Pral3672g00002 618 Gene3D Phosphorylase Kinase; domain 1 267 374 - -
Pral3672g00002 618 FunFam Leucine-rich repeat receptor-like protein kinase 30 186 - -
Pral3672g00002 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 578 - -
Pral3672g00002 618 MobiDBLite consensus disorder prediction 575 590 - -
Pral3672g00002 618 FunFam Somatic embryogenesis receptor kinase 1 267 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3672g00002 Pral-Chr3672 22021 26686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3672g00002 8 618 Receptor kinase-like Gene Family AT5G16000 68.218 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pral3672g00002 Pkinase 5.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3672g00002 - - gmx:100804283 923.694