Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral366g00002 ATGGAGCCACTTGGAGTCATCCCTGATGGGGAAATGAGTTGCTTTCGAGGAATTTTTGCCTCAGAAGAGCATGATTACTTGCCACAATTTCTTGGCCAAAGCTCACTTCTGCCCGGTGAACGTGATCGAATGCTTATCGGAATAGAATCTGCATTTCGCTCTGCTCCTGAAGCTGGGGAAAATGAGTACATTTTTAATTCTTTAGATGCTCCCAACCCAGATTTGCGGCTTATTCCTCAAGCAAGTAGTTTCAATACTAACTGTAGTGGCGATGCTTTCTTCGGTGCCAACCCGGGCCATATGAACTACTATCTCAGTGATCCTAATCAGGCACTAGCAAATGATGCCTGCATGTTCATGAATGTTTGCATGATGCATGAGAAAGACACTGGCACTTTCATCCCATCACCGGAAAATGTTTTGGTGGAAGAAACTGTTAGCTTTAATGAAGACAGAATAGGGGACAAATTGGAGAGTTCTAATCAAAGTCGAGCTGAGGTCACAGCTTTTGTTGCCGAACAGTTGCGCCTGAAAGGGAAGTTTGAAGTGCCAGAATTGGAGGCTTCAGCATCTGAGAACCAGAAGAAGAAACCTCGTTTCTCAAGAGATGTTCAAAAGAGTAAGAAAAATGCACAGCTAAAGAAGAACCACAAGGTTTCAGGGAATGGCTATGGGGCAGAAGAGACTGATACAGGATTACATGGACTGAGCTGTAGTAGTTACAGCTTAGAGGACGATAATGCTTCTCAGGAAAATAGCGGAGGAGCTTCCTCAGAGTCTAAATCACTAGTGACTCAAAACACAAATGGGAAGACCAGGGCCAGTAGGGGATCAGCAACAGATCCCCAGAGCCTTTATGCCAGGAAAAGAAGAGAGAGAATAAATGAACGACTGAGAATCCTACAGAATCTTGTTCCAAACGGAACAAAGGTTGATATAAGCACAATGCTTGAAGAGGCAGTCCACTACGTGAAATTTTTGCAGCTCCAAATTAAGCTTTTAAGTTCTGATGACCTGTGGATGTACGCTCCAATTGCTTATAATGGAGTTGACATTGGATTGAATCTCAGCCGCAAGGTTTCTCCACCAACATGA 1095 0.4384 MEPLGVIPDGEMSCFRGIFASEEHDYLPQFLGQSSLLPGERDRMLIGIESAFRSAPEAGENEYIFNSLDAPNPDLRLIPQASSFNTNCSGDAFFGANPGHMNYYLSDPNQALANDACMFMNVCMMHEKDTGTFIPSPENVLVEETVSFNEDRIGDKLESSNQSRAEVTAFVAEQLRLKGKFEVPELEASASENQKKKPRFSRDVQKSKKNAQLKKNHKVSGNGYGAEETDTGLHGLSCSSYSLEDDNASQENSGGASSESKSLVTQNTNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAYNGVDIGLNLSRKVSPPT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral366g00002 364 MobiDBLite consensus disorder prediction 242 290 - -
Pral366g00002 364 CDD bHLH_AtIND_like 279 341 - -
Pral366g00002 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 278 327 IPR011598 GO:0046983
Pral366g00002 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 278 343 IPR036638 GO:0046983
Pral366g00002 364 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 136 350 - -
Pral366g00002 364 SMART finulus 284 333 IPR011598 GO:0046983
Pral366g00002 364 MobiDBLite consensus disorder prediction 242 282 - -
Pral366g00002 364 FunFam Basic helix-loop-helix transcription factor 279 336 - -
Pral366g00002 364 Gene3D - 280 336 IPR036638 GO:0046983
Pral366g00002 364 MobiDBLite consensus disorder prediction 186 229 - -
Pral366g00002 364 MobiDBLite consensus disorder prediction 186 210 - -
Pral366g00002 364 Pfam Helix-loop-helix DNA-binding domain 288 328 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral366g00002 Pral-Chr366 8548 10073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral366g00002 244 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 77.966 2.66e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral366g00002 HLH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral366g00002 - - pcin:129302137 553.518