Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3669g00002 ATGCTCTTCAACTATCTCAACCTCGCTTACTCCCATTTCAAATGGGTTTTAGAGTTCCTTCTCTACCAACCATTTTACAGCCTCCGTCTTCATCATCATCAACCTCTTCAAGATCAGTTTCATATATTTACAGAAGAAGAAGTAGAGAGATGGCGTCCTTGTGAAGGAGGAGAAGGAGAAGGAGAAGTGGATTGTGCAGTGTGTCTGAGCAAGATCGGTGAAGGAGATGAAGTTAGAGTTCTGAGATGTGAACATGCTTTCCATAGAAACTGTTTGAATCAATGGGTTGCATTCAGGAACTTCACTTGTCCTCTTTGTAGGGATTTTCTGGGTTCTGGGATTAGGAATGTTGTTCATGATGATGGAGGAGGAACACATGTGATTTTCTTTAAGTTTTCTTCGTTCTCTGGTAATTCTGAACGTGACAACTGGTGGCTAAGTTCATCGTAG 450 0.4156 MLFNYLNLAYSHFKWVLEFLLYQPFYSLRLHHHQPLQDQFHIFTEEEVERWRPCEGGEGEGEVDCAVCLSKIGEGDEVRVLRCEHAFHRNCLNQWVAFRNFTCPLCRDFLGSGIRNVVHDDGGGTHVIFFKFSSFSGNSERDNWWLSSS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3669g00002 149 SMART ring_2 65 106 IPR001841 -
Pral3669g00002 149 Pfam Ring finger domain 64 107 IPR001841 -
Pral3669g00002 149 SUPERFAMILY RING/U-box 64 111 - -
Pral3669g00002 149 PANTHER RING ZINC FINGER PROTEIN-RELATED 46 110 - -
Pral3669g00002 149 ProSiteProfiles Zinc finger RING-type profile. 65 107 IPR001841 -
Pral3669g00002 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 112 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3669g00002 Pral-Chr3669 31708 32274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3669g00002 64 112 C3H Transcription Factor Family AT1G15100 61.224 2.78e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3669g00002 K16282 - pcin:129296604 196.823