Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3669g00001 ATGGCCGCCACCACTCTTGCAATAATCTCCAGATTTTGTATCCAACTATTCAGCATGCTCTTCAACTACCTCAAGCTAGCTTCTTCCCGTTTCAAATGGGTTTTAGATTTCCTTCTCTACCAACCATTTTACAGCCTTCGTGTTCATCATCATCATCAGCCGCTTCAGGAGTTTCAGATCCTTTCAGAAGAGCAGGTGCAGATATGGCGTCATTGTGAAGAAAAAGGAGAAGAAGAACAAGTGGATTGTGCAGTGTGTCTGAGCAAGATTGGTGAAGGAGATGAAGTTAGGGTTCTGAGATGTGAACATGTTTTCCATAGAGATTGTTTGAATCAATGGGTTGGATTCAGGAACTTCACTTGTCCTCTTTGTAGGGACTTTCTGGGTTCTGGGATTAGGTCTGTGAATTGCGAGGGAGGAGAAGCAAATTTGCTTTTCTTTAAGTTTTCTTCTTTCTCTGATAATTATTCTGAGCGAGACAACTGGTGGCTGCGGTGA 498 0.4277 MAATTLAIISRFCIQLFSMLFNYLKLASSRFKWVLDFLLYQPFYSLRVHHHHQPLQEFQILSEEQVQIWRHCEEKGEEEQVDCAVCLSKIGEGDEVRVLRCEHVFHRDCLNQWVGFRNFTCPLCRDFLGSGIRSVNCEGGEANLLFFKFSSFSDNYSERDNWWLR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3669g00001 165 SMART ring_2 83 124 IPR001841 -
Pral3669g00001 165 SUPERFAMILY RING/U-box 82 129 - -
Pral3669g00001 165 Pfam Ring finger domain 82 125 IPR001841 -
Pral3669g00001 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 129 IPR013083 -
Pral3669g00001 165 CDD RING-H2 83 125 - -
Pral3669g00001 165 PANTHER - 9 126 - -
Pral3669g00001 165 ProSiteProfiles Zinc finger RING-type profile. 83 125 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3669g00001 Pral-Chr3669 28587 29156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3669g00001 82 130 C3H Transcription Factor Family AT1G15100 63.265 1.60e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3669g00001 K16282 - pcin:129296604 199.134