Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3665g00001 ATGATGGAATTAACTAATTTTGGTGGAAATACAATTAGAAACGGTAATGAAGCTCCGTTTGAAGTTCATGTTCTGGTTGTTGATGGCGATGCTGCTTCGCTTGAGATTACGTTGGGATTACTTGCTTCCTTGAAATATAAAGCTGAAGGAACAAAGCATCCATTGATTGCGTTGGAAAGAGTAAGAAAGAAAGAAGGGTACTTCGACCTAGTAGTGATAGAGCCTCTTTTGCCAGATATTGATGTATTCCAATTCAAGCACAAACTTGATCAGCATTTCTCCATACCATTAATAATGATTTCGATAGACAAAGATGAGAGAATGATGGAGAAAGCCTTGAAGAGTGGTGTGGCACGTTACATAGTGAAACCAGCAACAGAAAGTGACTTCAAAGAAGGCGGTGGTGATAACAATAATGGGTCGTCGTCGTCTTCGTCGTCCAGGGTTACCAAGAAGAGCAAAGTTGTGTGGACCAGTGATCTTCAAAATCGTTTCTTACAAGCCATAAATATCATTGGATTAGAAAACGCAGTTCCAAAAAAGATTCTTGAAGTCATGAAAACACCCGGACTCACCAGGGAAAATGTGGCAAGTCACTTGCAGAAATATCGGCTTTTTCTAAAGAGAGTTGCTCGAATGTTTGCGATGGTAATCAACAATGAGATAGACAACAAGGATGTCTTAACAAGTTTGGCATCAAAGTACCCTGACTCACTGATGTTAAAGAACATCGAAGAGGAATTCAGAAGAATGTTACAGTCCAGAAAACTCAGAACTTCTTCTTCATATCCTTATTATTCATCCTACAAGAACCCTGATAATTCTTCATCCTTATTCAAGCCTCCCAAGTTTCAGTATCATCCTCATAATTCTAGTAATTTCTCCACCCAAATGATGATGAACCCTAATTATGGACTATTACATGGTCAAGTTCCTGCAAGTACTTCAAGTAATTACACCACTAATAATGCTGGATTATTAGGGTTAGGGTTTCCTCGGACTTCATCGAGCACTACTTATTATGAGTATTGTGGGTATAATAATTCCTTCAACAATGGCTCAAACTATTGTTATTTGGGTGATGAAAGGGTTTCTCCTGCTGGTAATAACGAGCTTTTTAGGGAAAACCAAAGTTTACCAGACATGAAGAGAAACAATAATAATAATAACAATATTCTGGAAAATATGTTGGAGCAACAAGGAAAGCCAAACGAGGTTTTGAATAATGAAGGAGATCACTGTCATCAAACTATTGGAGTTGAAGGGAACAACGGATTTGATAGTGGTAATATCATAATGCAAGAAGATCATAATTACAGGTTCTCTAATCAGGTGTTGGAAATGCTGAATCTCTCTGAGAAAGACTTGGAAGATCTCAAAGACCCCGAACAAATTCCTCAGGATTGGACCGATGACTTCCTTGAATCTTTACTCAACAATGGAGGGTAA 1449 0.3823 MMELTNFGGNTIRNGNEAPFEVHVLVVDGDAASLEITLGLLASLKYKAEGTKHPLIALERVRKKEGYFDLVVIEPLLPDIDVFQFKHKLDQHFSIPLIMISIDKDERMMEKALKSGVARYIVKPATESDFKEGGGDNNNGSSSSSSSRVTKKSKVVWTSDLQNRFLQAINIIGLENAVPKKILEVMKTPGLTRENVASHLQKYRLFLKRVARMFAMVINNEIDNKDVLTSLASKYPDSLMLKNIEEEFRRMLQSRKLRTSSSYPYYSSYKNPDNSSSLFKPPKFQYHPHNSSNFSTQMMMNPNYGLLHGQVPASTSSNYTTNNAGLLGLGFPRTSSSTTYYEYCGYNNSFNNGSNYCYLGDERVSPAGNNELFRENQSLPDMKRNNNNNNNILENMLEQQGKPNEVLNNEGDHCHQTIGVEGNNGFDSGNIIMQEDHNYRFSNQVLEMLNLSEKDLEDLKDPEQIPQDWTDDFLESLLNNGG 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3665g00001 482 Gene3D - 148 211 - -
Pral3665g00001 482 Pfam Myb-like DNA-binding domain 155 204 IPR001005 -
Pral3665g00001 482 MobiDBLite consensus disorder prediction 129 148 - -
Pral3665g00001 482 SUPERFAMILY Homeodomain-like 150 209 IPR009057 -
Pral3665g00001 482 FunFam Two-component response regulator 148 211 - -
Pral3665g00001 482 ProSiteProfiles Response regulatory domain profile. 23 138 IPR001789 GO:0000160
Pral3665g00001 482 SMART REC_2 22 134 IPR001789 GO:0000160
Pral3665g00001 482 Pfam Response regulator receiver domain 24 130 IPR001789 GO:0000160
Pral3665g00001 482 MobiDBLite consensus disorder prediction 132 148 - -
Pral3665g00001 482 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 132 418 IPR044841 GO:0003700|GO:0006355
Pral3665g00001 482 SUPERFAMILY CheY-like 23 130 IPR011006 -
Pral3665g00001 482 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 151 208 IPR017930 -
Pral3665g00001 482 Gene3D - 21 133 - -
Pral3665g00001 482 NCBIfam myb-like DNA-binding domain, SHAQKYF class 152 206 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3665g00001 Pral-Chr3665 216280 233404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3665g00001 16 222 Response Regulator Gene Family AT2G25180 31.008 3.21e-32 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pral3665g00001 Response_reg 1.8e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3665g00001 - - pcin:129297056 320.857