Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3660g00001 ATGGCAGACGACCAGCCTCCTCCACCGGTGCCGGCACACCCAAAAGGCTATAAATTGACCGCCTCTTCAATCTCCTACGCCAAAAGCACCGCCACGATTCCACCATTCTTACATCTTTTCAATTGCTGTACCACAACAATCCCTCCTTCTTACATCCTCAATCATGTTTCCCTCACAGCCTACCCCTCCCAAATCCTCGCCATTGTCGGCCCAAGCGGCGCCGGCAAGTCCACCCTTCTCGACATCCTCCTCGCCGCCACCCGCACTTCCGCCACCTCGGGCGTTCTCCTCCTCAACTCCTCCCCCTTTAATCCTTCATCATTCCGGAAGCTATCTTCTTACGTCCCACAAGACGACGCCTGCCTCCCCCTCCTCACTGTCGCGGAGACGTTTGCCTTCGCCGCCCGCCTCCTCCAGCCCAAGCCCTTCGACACCGCTCCTCTTTCTCGCGACCTCGGCCTCAGTCACTTAGCTCATACTAGGCTCGCCGATGGGCTTTCCGGTGGCGAGCGAAGACGGGTCTCCATCGGCCTCAGCCTTCTCCACGACCCGGCTGTGTTGCTTCTCGATGAGCCCACCTCTGGTCTTGACAGTACCAGTGCTTTTAACGTCATGCAGATTCTAAAATCAATCTGTGTTTCACGTCACCGAACCATTGTGCTATCTATTCACCAGCCAAGTTTCAAGATTCTATCTGTCATTGACAGAATCTTACTTCTTTCCAAAGGATCAGTGGTTCATCATGGAACTCTTGCTTCACTTCAGAGTTTTCTTCACACTAATGGCTTCTCTGTGCCTCCTCAGCTCAATGCTTTGGAATATGCCATGGAAATATTGAACCAACTTGATGAGCTTGAACCCATGAACATCGCTCCTGATGAAGAAAGTCGTGGGAATTCTCCATCTAAGAATTTAGCCACCACTACTACAAGAAAGATGATCCGATATAGGAGCTCAAGAATCCATGAAATCTGTGCTCTTTACAGGAGATTTTGGAAGATCATTTACAGAACAAAGCAGTTACTTTTGACCAACACAATAGAAGCACTTCTCGTTGGCCTTGTCCTTGGAACCATTTACATCAACATTGGCTTCGACAAGGAAGGGATCGAGAAAAGGTTCGGTCTTTTTGCCTTCACTCTCACTTTCCTCCTTTCTTCCACCACTGAAACGCTTCCGATCTTCATCGGAGAGAGACCGATCTTACTGAGAGAAACATCAAGTGGGGTCTATAGGCTATCCTCTTACATCATCGCCAACACACTCGTTTTCCTGCCATACCTACTGGTTATTGCTGTTATTTACTCTATCCCAGTCTACTTCTTAGTGGGTTTGTGTGCTTCTTGGCTTTCTTTCGCTTACTTCGTTCTGGTCATTTGGCTCATAGTTCTAATGGCTAATTCATTCGTCCTCTTCTTGAGCTCTATTGCGCCTAACTACATTTCTGGGACTTCGCTGATGACAGTGCTTCTTGCTGCAGTGCTTCTTGCTGCGTTTTTTCTGTTTTCTGGCTATTTCATCTCCAAGGATAGCTTACCCAAATACTGGCTTTTCATGTATTTCTTTTCTATGTACAAGTACGCTCTTGATGCTCTTCTCATAAACGAATACTCTTGTTTGTTCACGAGGTGCTTCATATGGTACGAACAGAATGATGGAGAGTGTATGGTTACAGGAGGAGATGTGATGAACAAGAGGGGACTCAGTGAGGCACAGAGATGGACTAATGTGTATGCCTTGCTTGGTTTCTTTGTTTTGTATCGTGTGCTTTGTTTGTTCGTGTTGATCAGAAGGGTTTCCAGATCCAAAAGTTAG 1815 0.476 MADDQPPPPVPAHPKGYKLTASSISYAKSTATIPPFLHLFNCCTTTIPPSYILNHVSLTAYPSQILAIVGPSGAGKSTLLDILLAATRTSATSGVLLLNSSPFNPSSFRKLSSYVPQDDACLPLLTVAETFAFAARLLQPKPFDTAPLSRDLGLSHLAHTRLADGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFNVMQILKSICVSRHRTIVLSIHQPSFKILSVIDRILLLSKGSVVHHGTLASLQSFLHTNGFSVPPQLNALEYAMEILNQLDELEPMNIAPDEESRGNSPSKNLATTTTRKMIRYRSSRIHEICALYRRFWKIIYRTKQLLLTNTIEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFIGERPILLRETSSGVYRLSSYIIANTLVFLPYLLVIAVIYSIPVYFLVGLCASWLSFAYFVLVIWLIVLMANSFVLFLSSIAPNYISGTSLMTVLLAAVLLAAFFLFSGYFISKDSLPKYWLFMYFFSMYKYALDALLINEYSCLFTRCFIWYEQNDGECMVTGGDVMNKRGLSEAQRWTNVYALLGFFVLYRVLCLFVLIRRVSRSKS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3660g00001 604 Gene3D - 39 261 IPR027417 -
Pral3660g00001 604 ProSitePatterns ABC transporters family signature. 166 180 IPR017871 GO:0005524|GO:0016887
Pral3660g00001 604 SMART AAA_5 62 244 IPR003593 GO:0016887
Pral3660g00001 604 FunFam ATP-binding cassette transporter 42 260 - -
Pral3660g00001 604 Pfam ABC transporter 53 194 IPR003439 GO:0005524
Pral3660g00001 604 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 258 IPR027417 -
Pral3660g00001 604 Pfam ABC-2 type transporter 224 283 IPR043926 GO:0140359
Pral3660g00001 604 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 267 IPR003439 GO:0005524
Pral3660g00001 604 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 589 - -
Pral3660g00001 604 Pfam ABC-2 type transporter 323 537 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3660g00001 Pral-Chr3660 106119 108861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3660g00001 48 261 Calmodulin-binding Proteins AT2G36910 28.216 1.49e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3660g00001 K05681 - cave:132167224 866.685