Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3657g00007 ATGGCGTACGGGATGAAGCCTACCAAACCGGGTTTGGAGGAACCCCAAGAGCAGATTCACAAGATTAGGATTACTCTGTCCTCCAAGCACGTGAAAAATCTTGAGAAAGTTTGCGCGGACTTAGTTCGTGGTGCCAAGGACAAGAGGCTTAGGGTCAAGGGACCTGTGAGGATGCCCACTAAAGTTCTTCACATCACCACTAGGAAATCTCCATGTGGTGAAGGCACCAACACCTGGGATCGCTTTGAGCTCAGGGTGCACAAAAGAGTGATTGACCTCTACAGCTCCCCCGATGTGGTTAAGCAGATCACTTCCATCACTATTGAACCCGGTGTGGAGGTTGAGGTCACGATTGCCGATGCTTGA 366 0.5055 MAYGMKPTKPGLEEPQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3657g00007 121 Gene3D Ribosomal protein S10 domain 6 120 IPR036838 -
Pral3657g00007 121 PRINTS Ribosomal protein S10 family signature 56 71 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pral3657g00007 121 PRINTS Ribosomal protein S10 family signature 21 34 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pral3657g00007 121 PRINTS Ribosomal protein S10 family signature 78 92 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pral3657g00007 121 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 14 120 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pral3657g00007 121 Pfam Ribosomal protein S10p/S20e 23 117 IPR027486 -
Pral3657g00007 121 NCBIfam 30S ribosomal protein S10 20 118 IPR005729 GO:0003735|GO:0006412|GO:0015935
Pral3657g00007 121 ProSitePatterns Ribosomal protein S10 signature. 45 60 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pral3657g00007 121 SMART Ribosomal_S10_2 23 117 IPR027486 -
Pral3657g00007 121 SUPERFAMILY Ribosomal protein S10 21 118 IPR036838 -
Pral3657g00007 121 Hamap 30S ribosomal protein S10 [rpsJ]. 19 118 IPR001848 GO:0003735|GO:0005840|GO:0006412
Pral3657g00007 121 FunFam 40S ribosomal protein S20 6 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3657g00007 Pral-Chr3657 301803 303526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3657g00007 1 121 Cytoplasmic Ribosomal Protein Gene Family AT3G47370 90.984 3.80e-77 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3657g00007 K02969 - pvy:116124290 236.884