Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3648g00006 ATGGAGAATTACGCGTACCCTTCGTACCCTGACTCAGGCGAGTCGTCTCCTCGCTCCAGAGAGGTTGAATTCGAGAACCCTCCGCCGTGGGACGATCAGCAGCCGCCGCCCAATTACAAAGCTAAATTTATGTGCAGCTATGGCGGGAAGATCCAGCCTCGTAGCCACGACAATCAGCTCTCCTACGTCGGCGGCGAGACCAAGATCCTCGCCGTTGACCTCAACATCAAGTTCTCCACCATGATTTCCAAGCTCTCTGCCCTCTGCGACGGCGTTGATGTCACCTTTAAGTACCAGCTCCCCGGAGAAGAACTCGACGCCCTGATTTCCGTCACCAACGACGACGATCTAGAGCACATGATGCACGAGTATGATCGGCTGTACCGTGCTTCCGCTAAGCCCGCTCGCATGAGGCTCTTCCTCTTCCCTGCTAATACTAGCCAGACATCGAGTTTTGCCTCCGATCAGGACCGCTTCGTCGAGGCTCTCAACACGGCTCCGGGTCCGACTCCACCCGATACGGTTAAGCCGGCTCCTGTTCCTGGCAGCAACGTCGATTTCCTCTTCGGTCTGGAGAAAGGAGTACCGCCGGCGCAGCCACCGCCTGTGGCTGTTAAGTTTCATGACCCTGTTCCTGGACCTGTGGTGCCACCTCTGGAGTACCAAACAAGAGGTGGCCCTGAACGGGTCATGGGTTCGGATCCTTCTGTGAACCCGATTGAAGTTCAACGGCAGTTGCAGAGGATGCAAATTGGGGAGCATGATCAACCTGTGTATAGGAGAAAAAGCGAGGACAATTCAGCGGGAGGATATGCAGCTGGAGATTATTATGTTCAGAAATTTGCCGACAAGGCTCCTCCATCGAATTTGCCGGCCACAGCACCACCAGCTGGAGGTTATTGGCAGGAAAAGCAAGTTCATAGCGAGGGTTTTCAGCCTATGACGGCGTCAAACGGATCTGGAGGAGCAGACCAGCCGGTTTATGTTATCCCGCAGCCCGGAACTTTCTATCACGCGCCGCCGGTGGTACGTCCTCAGGCGGCACCAGCCACTCAAGGTTACTACGCAGTGCAGCGAATGGTTTCTGATGCCTACCGTGAGCAGCCAGTTTACAGCGCGTCGGCGGCGCCCCGAGCGCCATTTTCATCAGCGGCTCCGGCAACCTTGGCACCGGCTCAGCCTGTTAAACCTGCCGCTTATACAGATGGATTCAACGTGGTTCGCCCGACTGGGATGCCGGATAACTCAGCAGCGTATGCACAGGTGGCGTACGATAACTCAGCAGGGAGACAGTTTTACTACACTGCGCCGGGAGGAGTGATGCATCCGCCACAGTACCAAGGGGTTGTTCCGACGGCGGGCGCTGATATAAGACCCTCCGGAGTATCAATGGGTCAAGATCCTAAAGGGGTCAACAAGGTTTCCCAAGGTTAA 1434 0.5586 MENYAYPSYPDSGESSPRSREVEFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRSHDNQLSYVGGETKILAVDLNIKFSTMISKLSALCDGVDVTFKYQLPGEELDALISVTNDDDLEHMMHEYDRLYRASAKPARMRLFLFPANTSQTSSFASDQDRFVEALNTAPGPTPPDTVKPAPVPGSNVDFLFGLEKGVPPAQPPPVAVKFHDPVPGPVVPPLEYQTRGGPERVMGSDPSVNPIEVQRQLQRMQIGEHDQPVYRRKSEDNSAGGYAAGDYYVQKFADKAPPSNLPATAPPAGGYWQEKQVHSEGFQPMTASNGSGGADQPVYVIPQPGTFYHAPPVVRPQAAPATQGYYAVQRMVSDAYREQPVYSASAAPRAPFSSAAPATLAPAQPVKPAAYTDGFNVVRPTGMPDNSAAYAQVAYDNSAGRQFYYTAPGGVMHPPQYQGVVPTAGADIRPSGVSMGQDPKGVNKVSQG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3648g00006 477 CDD PB1_UP2 44 142 - -
Pral3648g00006 477 PANTHER OS05G0427100 PROTEIN-RELATED 9 365 - -
Pral3648g00006 477 SMART PB1_new 55 144 IPR000270 GO:0005515
Pral3648g00006 477 MobiDBLite consensus disorder prediction 457 477 - -
Pral3648g00006 477 MobiDBLite consensus disorder prediction 1 38 - -
Pral3648g00006 477 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 144 - -
Pral3648g00006 477 Gene3D - 61 143 - -
Pral3648g00006 477 Pfam PB1 domain 56 143 IPR000270 GO:0005515
Pral3648g00006 477 SUPERFAMILY CAD & PB1 domains 56 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3648g00006 Pral-Chr3648 38805 40511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3648g00006 39 165 MAP Kinase Kinase Kinase AT5G57610 43.284 3.59e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3648g00006 - - qsa:O6P43_031693 634.409