Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3643g00020 ATGTCCCCACCATCCAATCTTCTCCTTCTCTTCTTCCTCTTTCTTCCATTGCTCCTCCGAGCCCAACCTCCTCCGCCGTCTCCTCCTTCTCCTCCTTCTGCTCTCTGTAAGTTCACATTGTACCCAAAACTATGTCGTTCCATGCTTTCCGTCATCTCCTCCTCCCCGTCGGACCCCTACAATGCAGGCAAGTTCTCCATCAAACAGAGCCTCAAGCAAGCCAAGAAACTCCTTAAGGTCTTCGACGACTTCCTCCGCAGCCACCGCCATTCGGAATCCTCCCCGGAGGTTCGCGCCCTCGACGACTGCCGCGACCTCAGCCTCCTCAACCTCGATTACTTGGAAGCCGTCGCGGCCGACCTCCAAGCTGCAGTGACGGCCTCGGCCGAGCTCATAGACAAGGTCGAGAGCTACCTAAGCGCGGTGGCGACCAACCATTACACTTGCTACGACGGACTTGCGGCGGCGAACAGTAATATAGCGAAGGTGCTGGCGGTGGCATTGAGGAATGTGACGGAGATGTATAGTGTATCATTAGGGTTGGTAAGTGAGGCTTTGAATCAGAATGTGAAGAGCAAGTTTAAGACTCGCAAGCATGGACTTCCTTCTCAGTCTTACAAAGTCAGACAGCCTCTTGAGAAGCTAATTCAGGTTCTTCGGGGGAAGTACAGTTGCAAGGCATCATCAAAGTGCAAAAGCAGAAGTGAGAGGATTCTTCTGAGGGAAAGTGAAAGCAAAGGGATTCTATTAAACAGCTATGCAATTGTGAGCCATTTTGGCACTGATAACTTCACCTCCATTGGAGAAGCCATTTCTGCCGCACCTACAAACCTCAGACCAGAAGATGGCTACTTCCTTATCTATGTCAGAGAAGGATACTATGAAGAATATGTCATTGTTCCTAAACACAAGAAGAACATCTTGCTCATTGGTGATGGTATCAACCACACCATCATCACAGGCAATCACAGTGTCATTGATGGCTGGACAACCTTTAATTCTTCCACCTTTGCTGTTTCTGGGGAAAGATTCATAGCAGTGGACATCACATTCAGGAACACAGCAGGTCCAGCGAAGCACCAGGCGGTAGCAGTGAGGAACAATGCTGATCTCTCCACCTTTTATCGATGCAGCTTCGAAGGATACCAAGATACCCTCTATGCTCACTCCCTGAGGCAATTCTACAGAGAATGTGAAATTTATGGCACAGTTGACTTCATATTTGGCAATGCAGCTGTTGTATTCCAAAGCTGCAAAATCTATGCCAGGAAGCCACTTCCATTCCAGAAGAATGCCATCACAGCACAAGGCAGAACCGACCCGAACCAGAACACCGGAATCTCAATCCAGAATTGCAGCATTGAAGCGGCACAGGATTTGGCTTCAGATTTGAACTCTACTAATACTACCACCACCACAGGCTTGACATACCTGGGAAGGCCATGGAAGTTATATTCTAGAACGGTGTACATGGAGTCTTATATTGGGGATGTGATTGAACCTTCTGGTTGGTTAGAGTGGAATGGGACTGTAGGGTTGGACACTTTGTTTTTTGGTGAGTTCAATAACTATGGACCTAGGGCTAGTACAAACAATAGGGTTCAATGGCCTGGTTTTAACCTTCTGAATGCTACTCAGGCTTTGAACTTTACTGTCCTGAATTTTACACTTGGAGATACATGGCTTCCTGACACAGATATACCATACTCTGCAGGATTACTAGGAAATTAG 1731 0.4772 MSPPSNLLLLFFLFLPLLLRAQPPPPSPPSPPSALCKFTLYPKLCRSMLSVISSSPSDPYNAGKFSIKQSLKQAKKLLKVFDDFLRSHRHSESSPEVRALDDCRDLSLLNLDYLEAVAADLQAAVTASAELIDKVESYLSAVATNHYTCYDGLAAANSNIAKVLAVALRNVTEMYSVSLGLVSEALNQNVKSKFKTRKHGLPSQSYKVRQPLEKLIQVLRGKYSCKASSKCKSRSERILLRESESKGILLNSYAIVSHFGTDNFTSIGEAISAAPTNLRPEDGYFLIYVREGYYEEYVIVPKHKKNILLIGDGINHTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPAKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTVDFIFGNAAVVFQSCKIYARKPLPFQKNAITAQGRTDPNQNTGISIQNCSIEAAQDLASDLNSTNTTTTTGLTYLGRPWKLYSRTVYMESYIGDVIEPSGWLEWNGTVGLDTLFFGEFNNYGPRASTNNRVQWPGFNLLNATQALNFTVLNFTLGDTWLPDTDIPYSAGLLGN 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3643g00020 576 Pfam Plant invertase/pectin methylesterase inhibitor 34 180 IPR006501 GO:0004857
Pral3643g00020 576 Gene3D - 252 575 IPR012334 -
Pral3643g00020 576 Pfam Pectinesterase 254 558 IPR000070 GO:0030599|GO:0042545
Pral3643g00020 576 NCBIfam pectinesterase inhibitor domain 7 182 IPR006501 GO:0004857
Pral3643g00020 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 34 183 IPR035513 -
Pral3643g00020 576 SMART PMEI_2 27 181 IPR006501 GO:0004857
Pral3643g00020 576 CDD PMEI-like_3 34 184 - -
Pral3643g00020 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 185 IPR035513 -
Pral3643g00020 576 SUPERFAMILY Pectin lyase-like 253 572 IPR011050 -
Pral3643g00020 576 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Pral3643g00020 576 PANTHER PECTINESTERASE 33 563 - -
Pral3643g00020 576 FunFam Pectinesterase 249 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3643g00020 Pral-Chr3643 183213 189262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3643g00020 5 574 Carbohydrate Esterase AT3G10720 55.267 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3643g00020 K01051 - gmx:100816503 818.92