Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3643g00001 ATGATGACGTCGTTTCCGTCCAAAAACCTATGGATTCAACGGCAACAATGCCCATGCGGAGATTGGAAATGTTTTGTGACTTGTGAGGGCGATGGCGAAGAGATTTCAGCTGGACCGGAGTCAGTGAAGACAGAGAAAGCATCATCAGAAGCTATGATTTCACCCTATGTAGGAATGGTGTTTAAGAGTGATGATGATGCATTTGAATATTATGGGAATTTTGCCCGGAAAAATGGGTTCTCAATTAGAAAAGAAAGATCCAGACTTAGCCCGCAATTAGGTGTTTATAAACGTGACTTTGTTTGTTACCGTTCAGGGTTTGCCCCAGTGAAGAAAAAGTCTAATGGAGAACACCATAGAGATAGGAAATCCGTACGCTGTGGATGTGATGCAAAAATGTATCTGTCAAAGGAGATTGTAGATGGAGTTTCTCACTGGTTTGTTGTGCAGTTTAGTAATGTACACAATCATGAACTCTTGGAAGATGACCAAGTACGGCTTCTTCCAGCATATCGTAAAATACAAGAGGCTGATCAAGAGCGTATACTCTTACTTTCTAAAGCCGGGTTCCCAATTCATCGAATAGTGAAGATGCTTGAGCTGGAAAAGGGGATTCAAGGTGGGCAACTGCCATTCTTGGAAAGGGATGTGAGGAATTTTGTTCAAAACCGGAAGAAGGTTATTCAGGAAAATGAAGCATTGCTGAGTGAGAAAAGAGAAAATGACGTATTGGAACTTCTTGAGTCATGCAAAACCATGAAAGAGACAGATGATAACTTTGTTTATGATTTTACAGTGGATGGGAATGAAATGGTTGAGAATATAGCCTGGTCTTATAGTGACTCTGTTCATGCATATTCTATGTTTGGTGACGTGGTTTATTTTGACACTACATACCGATCAATCACATATGGATTGGTCTTTGGGGCATGGTTTGGTATTGACAACTATGGCAGAACCATTTTCTTTGGTTGTGTTCTATTGCAGGATGAAACACAGCGGTCCTTCTCTTGGGCGCTCCAGAGTTTCGTACGACTCATGAGAGGAAGATGTCCGCAAACAATTTTAACCAATATTGACCCTAGCCTTAGAGACGCCATAAGAAGCGAATTGCCAGGCGCTAAACATGTAATCTCTATATGGTGTATAATGCCCAAGGTACCTTGCTGGTTTTCTCTTCCTCTTGGGCCTCGCTATGAAGAATTTAAATCTGAGTTTGATGCATTATATCACATTGAGAACTCAGAGGAATTTGAACTCCGATGGAACCAGATGACATCTGCCTTTGATCTTGGATCAGATAAGCATATTGATCTACTCTACACTTTGAGGGCATCTTGGGCATTGTCTTATGTTAGAGGTTTCTTTCTGGCTCAGATGGCAACAACAGCTTACTTAAAGTCATTAGACAGTTTTTTGAAAGGTGTCTTTAGTGCACAAACATGTTTACGGAGCTTTTTCGAGCAGGTTGGCATTTCTGCAAATGTTCTTCATCATTCTCGTCAAGAAACTCCATATGTGCATCTCAAAAGTTGCATACCTATTGAAGAGCATGCCCGGAGTATATACGCACCTTTTGCTTTTAATGCCTTGCAACAAGAATTATTGCTAACAATGCAATATGCTGCATCTGAAATGTCCAATGGATCATATATTGTACGCCACTTCAAAAGGATGGATGGCGAGCGTCTCGTGATATGGCTAGCTGAAGATGAACAAATCCATTGTTCTTGCAAGGAATTTGAATCGTCAGGGATATTGTGCAGACATGCTCTTCGTATATTCATAATAAAGAGTTACTTTCAGCTCCCTGATAAGTATTATCTAAGTAGATGGCGACAACATGAATCCTCTTTACTTCTTGATAATGATCATAGTAATAATAATCAAAGTATTGAGGATGAATGGTTTCAAGAATATCAGTCCCTTGCCGAAACTTTGTTTGCAGAATCTTCGATCACAAAGGAGCGATCTGACTTTGTTCGTAGAGAACTGACAAAAGAAATCACTAGGATTCTTAGCGAGGTTAGAAATCTGCCTGAAAATGATGGAGTCCCAATGGACTTGACTATTTCACCAAACATTTAG 2088 0.4023 MMTSFPSKNLWIQRQQCPCGDWKCFVTCEGDGEEISAGPESVKTEKASSEAMISPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRLSPQLGVYKRDFVCYRSGFAPVKKKSNGEHHRDRKSVRCGCDAKMYLSKEIVDGVSHWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPIHRIVKMLELEKGIQGGQLPFLERDVRNFVQNRKKVIQENEALLSEKRENDVLELLESCKTMKETDDNFVYDFTVDGNEMVENIAWSYSDSVHAYSMFGDVVYFDTTYRSITYGLVFGAWFGIDNYGRTIFFGCVLLQDETQRSFSWALQSFVRLMRGRCPQTILTNIDPSLRDAIRSELPGAKHVISIWCIMPKVPCWFSLPLGPRYEEFKSEFDALYHIENSEEFELRWNQMTSAFDLGSDKHIDLLYTLRASWALSYVRGFFLAQMATTAYLKSLDSFLKGVFSAQTCLRSFFEQVGISANVLHHSRQETPYVHLKSCIPIEEHARSIYAPFAFNALQQELLLTMQYAASEMSNGSYIVRHFKRMDGERLVIWLAEDEQIHCSCKEFESSGILCRHALRIFIIKSYFQLPDKYYLSRWRQHESSLLLDNDHSNNNQSIEDEWFQEYQSLAETLFAESSITKERSDFVRRELTKEITRILSEVRNLPENDGVPMDLTISPNI 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3643g00001 695 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 643 IPR031052 GO:0006355
Pral3643g00001 695 Pfam MULE transposase domain 292 384 IPR018289 -
Pral3643g00001 695 ProSiteProfiles Zinc finger SWIM-type profile. 564 599 IPR007527 GO:0008270
Pral3643g00001 695 Pfam FAR1 DNA-binding domain 69 160 IPR004330 -
Pral3643g00001 695 SMART 26again6 574 601 IPR006564 GO:0008270
Pral3643g00001 695 Pfam SWIM zinc finger 571 596 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3643g00001 Pral-Chr3643 3700 6257 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral3643g00001 MULE 3.2e-16 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3643g00001 - - gmx:100817107 1172.15