Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3639g00003 ATGGATCAGCCCACACAATTGGTTTTGCTTTTAATAGCTCTTCTCCAATCCATATCAGGAGTAACTTCAACAAAGTTCACAGTAGCTAACAAATGCAGCTACACAATATGGCCAGGCATTGTTTCAAATGATCCATTATCAAGCACCGGTTTTGTTCTTAAAACAGGTGAATCTAGGATCATTTCTGCTCCCACTTCTTGGAATGGCCGCTTTTGGAGTCGAACTCAATGCACACAAGACTCCACTGGAAACTTCTCTTGTGTTACCGGTGATTGCGGCTCCAGGAAGCTGGAATGCCAAGACAAGGGAGGTACACCACCTGCGACATTGATAGAATTTTCTCTAGGCCAAGTCCAAGGGCAAGATTATTATGATGTGAGCTTGGTAGATGGATTCAATGTTCCTGTAGCTGTTGTTCCTCACGGTGGTTGTGGAGAATGCAAGAGCACATATTGTCTGGCAGATATGATCAGCCTATGCCCTTCAGAGTTGAGGGTAACGAGCAAAGATGGAAAAGTTGTGGCGTGCAAGGGCGCTTGTATGGCAGATGGCTCATCATCATTACAATCCTGTGTTAGCAATCCTTCCAAGCCCTCATCTTCTGCAGAACTATTCAAGAGTGTTTGCCAACGTGCCTATAGCTATCCAGCAGATTATAATCAAACCAATTTCAGATGTAAAGGCGCAGATTATAATATCACCTTCTGTGAATCCCCTTACACAAATTTGGACACATCTGGCTCCTCATCATGCACGGAAAGCATCACAACATCTCATTCCATCAAGGATCCAAAGACAATAAGCTCCAAAGGGGGTTTGTTCACACTAGGGTTCTTCACTCCTGAAAATTCTACAAATCGCTATGTGGGAATTTGGTACATGTCCAATTCCACTATTGTATGGGTAGCTAACAGAAATCGACCATTAAGGGATACTTCAGGAATTGTTAAGGTATCTGAAGATGGCAATCTTGTCATATTAGATGGGCAAAACCAAACCATTTGGTCATCAAATGTGTCAAATATTTCATCTACTACTAGTTTTCAGATTTTAGATTCTGGAAACCTTGTCCTAATTGATAACTTGACGAAAACTATATGGCAAAGTTTTGAGCATCCTTCAGATACATTGTTGCAAAGCATGAAAATTACCAGCAACAAAAGAACAGGGGAGAAACGAAAGTTAACAGCATGGAAAAATCAGTCTGATCCATCACTTGGCAATTTCTCTATGAGCCTAGAACAACAAAATTTTGCAGAACTGTTCATATGGAATGCAACTAGCCCCTACTGGCGTAGTGGTCCATGGAATGGCCAAGGCCTTACAACAGTTCTCAGGATGAGTTCTGAGTATGATAATGGTGCTGAAGAGATGGTTTTTAGCCTCTCAAATGGGTCTGACACCAAAGAGATGGTTGTTTTGAATGCAAAAGGAAAGTTATTACATAAACAATGGGATGATACTAAGAGGAGATGGCTAGAAACAAATCTTTTTCAAAATTCAGATTGTGATGTCTATGGTATATGTGGGGAATTCGGAATTTGCAATTCAAAGAGTACGCCAAAGTGCAGTTGTTTGAATGGGTTTGAACCAAGAAATGGGGAGGAATGGAATAGACAAAATTGGGCAGGTGGTTGTGTTAGGAAATCAACTCTGCCATGTGAGAAAATGAAAAATGCCAGTTCTAATGGAAAGGAAGATACGTTTTTCCATCTGCAAAATGTTAAACCACCAAACTTTGGAGAACAATCATCTAATACAGAAGATGATTGTAGAATACAGTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATAATTCAGTGCTTGGCTGTATGACTTGGAAAGAAAATCTAATTGACGTACAACAATTCTCAAATGGAGGAGTTGACCTATACATTCGTGCAGCCAATTCAGATCTTGATAAGAAGAGACATAGGACATTCATCATTATCATTGTTGCAGTAATAGGAACTATTATTATCAGTGTCAGTTGTGCATGCTTCTTATGGAAATGGAAGGCAAAACATTCAGCAGGAAAACGAAATAGCATAGAGTTCTTGTCAAAAAAGCGTGGTGCAAATGTAGACAAAACAAGAGGCAATATTATTGGAACCTTGTCACAAGTTAAATTCCAGGAGTTATTGATCTATGATTTTGAAAAGGTTGCAACTGCTACAAACAACTTTCAATTGACCAATAAACTTGGGCAAGGAGGTTTTGGTCCAGTCTATAAGGGAACACTGCAAGATGGTCAGGATATAGCAGTTAAGAGATTATCAAGAGCATCTCGACAAGGACAAGAAGAATTCATGAATGAAATGATTGTCATTTCCAGGCTTCAACATCGTAATCTTGTAAAACTTTTAGGTTGCTGTATTGAAGAAGAAGAAAAGATGTTGATCTATGAATACATGCCAAATAAAAGTTTGGATGCATTTATATTTGATCCAGAAAAACGTAAACTTCTAGACTGGGAAAAGCGCTTTGTCATAATTGAAGGAATAGCGAGAGGAGTACTTTATCTTCATAAGGACTCTAGACTAAAAATTATACATAGGGACCTAAAGGCAAGTAATATCTTGCTAGATGAGAACCTGATTCCAAAAATATCAGATTTTGGTATGGCTAGAATTTTCAAAGGAAGTGAAGATCATGCTAACACAAGGAGAGTTGTTGGAACCTATGGCTATATGTCTCCAGAATATGCTATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTTTACTATTAGAGATTATAAGTGGAAGAAGAAACTCAAGCTTTTATAACAATGAGCAGTCTCTTAGCCTTCTAGGATTTGCATGGAAATTATGGAATGAGGGAAACATTGTACAGCTAATAGACCCAGAAATATCTAATCAAAAGCTGGAGAAGGATATATTGAGGTGCATACACATAGGACTTCTATGTGTACAAGACCTTGCAATAGAGAGGCCAAGTATGAGCACTGTAGTTTCTATGCTTAATAGTGAGATCGTCAATCTTCCTCCTCCAAGGCAACCTGCGTTCATCCAATGGCAGAGTATATTGAATCAATTGACCCCAGAAGAGAATCAAAGATTATTTTCCAACAACGAACTTAGTGTTAGCGACATACAAGGCAGATAG 3147 0.3886 MDQPTQLVLLLIALLQSISGVTSTKFTVANKCSYTIWPGIVSNDPLSSTGFVLKTGESRIISAPTSWNGRFWSRTQCTQDSTGNFSCVTGDCGSRKLECQDKGGTPPATLIEFSLGQVQGQDYYDVSLVDGFNVPVAVVPHGGCGECKSTYCLADMISLCPSELRVTSKDGKVVACKGACMADGSSSLQSCVSNPSKPSSSAELFKSVCQRAYSYPADYNQTNFRCKGADYNITFCESPYTNLDTSGSSSCTESITTSHSIKDPKTISSKGGLFTLGFFTPENSTNRYVGIWYMSNSTIVWVANRNRPLRDTSGIVKVSEDGNLVILDGQNQTIWSSNVSNISSTTSFQILDSGNLVLIDNLTKTIWQSFEHPSDTLLQSMKITSNKRTGEKRKLTAWKNQSDPSLGNFSMSLEQQNFAELFIWNATSPYWRSGPWNGQGLTTVLRMSSEYDNGAEEMVFSLSNGSDTKEMVVLNAKGKLLHKQWDDTKRRWLETNLFQNSDCDVYGICGEFGICNSKSTPKCSCLNGFEPRNGEEWNRQNWAGGCVRKSTLPCEKMKNASSNGKEDTFFHLQNVKPPNFGEQSSNTEDDCRIQCLENCTCKAYSYNSVLGCMTWKENLIDVQQFSNGGVDLYIRAANSDLDKKRHRTFIIIIVAVIGTIIISVSCACFLWKWKAKHSAGKRNSIEFLSKKRGANVDKTRGNIIGTLSQVKFQELLIYDFEKVATATNNFQLTNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASRQGQEEFMNEMIVISRLQHRNLVKLLGCCIEEEEKMLIYEYMPNKSLDAFIFDPEKRKLLDWEKRFVIIEGIARGVLYLHKDSRLKIIHRDLKASNILLDENLIPKISDFGMARIFKGSEDHANTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRRNSSFYNNEQSLSLLGFAWKLWNEGNIVQLIDPEISNQKLEKDILRCIHIGLLCVQDLAIERPSMSTVVSMLNSEIVNLPPPRQPAFIQWQSILNQLTPEENQRLFSNNELSVSDIQGR 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3639g00003 1048 SMART serkin_6 730 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3639g00003 1048 SMART blect_4 258 373 IPR001480 -
Pral3639g00003 1048 FunFam THAUMATIN-LIKE PROTEIN 1 24 237 - -
Pral3639g00003 1048 ProSiteProfiles Protein kinase domain profile. 730 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3639g00003 1048 SUPERFAMILY alpha-D-mannose-specific plant lectins 289 438 IPR036426 -
Pral3639g00003 1048 Pfam S-locus glycoprotein domain 431 532 IPR000858 GO:0048544
Pral3639g00003 1048 ProSiteProfiles PAN/Apple domain profile. 554 637 IPR003609 -
Pral3639g00003 1048 SUPERFAMILY Protein kinase-like (PK-like) 715 1030 IPR011009 -
Pral3639g00003 1048 Pfam PAN-like domain 564 622 IPR003609 -
Pral3639g00003 1048 CDD STKc_IRAK 736 1002 - -
Pral3639g00003 1048 Gene3D Thaumatin 24 236 IPR037176 -
Pral3639g00003 1048 Gene3D - 248 371 IPR036426 -
Pral3639g00003 1048 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Pral3639g00003 1048 ProSiteProfiles Bulb-type lectin domain profile. 252 371 IPR001480 -
Pral3639g00003 1048 Pfam Thaumatin family 30 236 IPR001938 -
Pral3639g00003 1048 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 806 1009 - -
Pral3639g00003 1048 SMART ntp_6 564 636 IPR003609 -
Pral3639g00003 1048 SUPERFAMILY Osmotin, thaumatin-like protein 24 236 IPR037176 -
Pral3639g00003 1048 CDD B_lectin 258 373 IPR001480 -
Pral3639g00003 1048 CDD TLP-PA 25 236 - -
Pral3639g00003 1048 Pfam Protein tyrosine and serine/threonine kinase 731 999 IPR001245 GO:0004672|GO:0006468
Pral3639g00003 1048 CDD PAN_AP_plant 561 635 - -
Pral3639g00003 1048 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 248 370 - -
Pral3639g00003 1048 FunFam receptor-like serine/threonine-protein kinase SD1-8 705 805 - -
Pral3639g00003 1048 SMART tha2 26 237 IPR001938 -
Pral3639g00003 1048 Gene3D Transferase(Phosphotransferase) domain 1 806 1007 - -
Pral3639g00003 1048 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 250 993 - -
Pral3639g00003 1048 Gene3D Phosphorylase Kinase; domain 1 693 805 - -
Pral3639g00003 1048 Pfam D-mannose binding lectin 298 399 IPR001480 -
Pral3639g00003 1048 ProSiteProfiles Thaumatin family profile. 23 236 IPR001938 -
Pral3639g00003 1048 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Pral3639g00003 1048 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Pral3639g00003 1048 PRINTS Pathogenesis-related protein signature 70 81 IPR001938 -
Pral3639g00003 1048 PRINTS Pathogenesis-related protein signature 49 58 IPR001938 -
Pral3639g00003 1048 PRINTS Pathogenesis-related protein signature 227 236 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3639g00003 Pral-Chr3639 29798 33981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3639g00003 687 1031 Receptor kinase-like Gene Family AT4G23140 53.693 3.33e-124 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3639g00003 PK_Tyr_Ser-Thr 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3639g00003 - - pcin:129286414 1033.48