Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3637g00003 ATGGTTTCTCCAAGGCTGATTTCTCCTCTCTTCTTCTTTCTGATCCTCAACCTAACCCTAATATCTCATCACGGCACCAATGCCCAGCAAAACTTCTTGAAATTCTTCTGCGGTAACAGCACTGTCGACGATGATACCACCAATAGTACCTTCAAAACCAACTTAAAATCCCTTTTATTTAACATCTCTTCCGACACAAACATCGACTATGGCTTCTACAACTTTTCCTCCGGCCCAAACTCCGACAAAGTCAACGTTATTGGTCTATGCCGAGGAGATGTTAAGGTACAAGATTGTCGCAGTTGTCTCACAGATTCAAGAGTTGTTCTTCTCCAAGTTTGTGCCCCTAATGTTAGAGAAGCAATCGGGTGGTACGATAACTGCTTTCTCCGATACTCCAACCGAACCATATTCGGCGTCATGCAAACACAGCCATATTTCTATCTGTGGAACACACAGGACGCGTTGCAGAAGGACCAGTTCAAGTTTGTGGTGACAGCATTGATGAAGTTCTTGAGAGAGAAAGCTGCTTCCGGCGACTCTGTCCGGAAATTTGCGGCGGCGAACGCGACGGGACCGAGCAATCAAACGATATACGGTCTTGCACAGTGCACACCGGACTTCTCGAGCAAGGATTGCAATAATTGCTTGAATGGGGCAATCTCTGAAATCCCGCAATGTTGCGATGGAATGAAAGGTGGAAGAGTGGTAAGACCCAGCTGCAACATTAGATATGAAACCTACAGTTTCTTCGATCCTGCTGCTTCACAATCTTTCACATCACCGCCGTTGCCACAGTCTCCTCCGGCAGTTCTTGATTACGTACCGAAACAAGGAAAGTGCAACTCACCCCGAGCTATAATTGCCGTGGGAGTGCCAATTATTGTGTTGTTGGCAGTGCTCATCTTTGTGGGCCTACTTAAAGCCAGGAGAGCCAAAAATATCGCAACTAATAGGTCAACAAATATTTCATGTTCTGAGTTAAAGAATGAAGTGCAGAAAGTGAAAGTGCAACAAGAACAGAGTAAATTACAACAGCAACAGATGAATGTAGCTTTGGCATTCCTACTTCAACACTTTGAGGGTCAGCTGCCATCTGAGCTTGTTACCACGGGCGCTATTGCCCAATCAAACTTCTTAAAACTCAACTGTATTGGGACTACTGATGATAGCAACAGTACCTTTCAGACTAATCTCAAAAACCTTTTGATGTATATCTCCAACACGCAAATCGACTATGGCTTCTACAACTTCTCTTCCGGCAGTAAATCTGACAGGGTTAACGCCATCGCACTCTGCCGAGGAGATGTTAAGGAACCAGATTGTCGCAGTTGTCTCACAGATTCAAGGGTTGTCCTTCTCCAGGTGTGCCCTAACGTGAAGGAGGCGATCGGCTGGTACGATAACTGCTTCCTGCGATACTCCAACCGAACCATATTCGGTCTCATGGAAACATCGCCATATTTCTACTGGTCGGACACACATGATGTGTTGGAGAAAGACCAGTTCAAGAGCGTGGTGACGAAGATGATGAATCTTTTAAGAGACAAGGCTTCTTCAGGCAACTCTATTCGGAAGTTTGCGGTGGCGAATGCGACAGGTCCGAGCAATCAGACGATATATGGTCTAGTACAGTGCACGCCAGACTTGTCACAGAACGCTTGCAGAGCTTGCTTGAATGTAACAATCTCGGAAATTCCGAAATGTTGCAATGGAATGAAAGGTGGCGGAGTGCTGCAACCAAGTTGCAGCATTATATATGAGACTTACCTCTTCTTTGATCTTGCGGCTGCACAACCATTCATATCATTACAGTCGTCGCCGTCTCCTCTTCTGCCATTGCTCCTCCAACGGCACCCAAGAAAGGTATCAATATTTGCATGCAGAAAGAGAAACACGACAGGAATTGTTGTTGCCATAGTTGTGTCAACTGTTGCGTTCATCGCACTGGTCATCTTCATCGTTATCATTAAAGCCAGGAGGTTAAAGAACACTATCCGAACCGGAGAAGATGAAGATGAAATCATGACCGTTGATTTTTCTGATGCAAATAAGCTTGGACAGGGTGGATTCGGACCTGTTTACTTGGGCAGGTTATATAATGGACAAGAGATCGCTGTAAAAAGGTTGAGTAGAGATTCTGGGCAAGGTGAAATGGAGTTTAAGAATGAAGTGTTGCTGGTGGCCAAGCTACAGCATCGGAATTTAGTGAGGTTACTTGGTTTTTGTCTCAAAAAAAAAGAAAAGCTCCTTATTTACGAGTTTGTTGCCAACAAAAGCCTTGACTGCTTCATCTTTGATTCCGTCAAAAGGGTGAAATTGAATTGGGAAAAGCGCTACAAAATCATAGAAGGCATTGCCAAAGGCCTTGTATACCTTCATCATGATTCTCGAATAAGAATTGTTCATCGTGATCTCAAAGCAAGCAACGTGCTCTTAGATAAAGAGATGAATGCTAAAATATCAGACTTTGGTATGGCAAGATTATTTGCGGTAGATCAAACTCAAGCCAAGACAAGTACAGTTGTTGGGACCTATGGATACATGGCACCAGAATACGTGATGAATGGAATGTTTTCAACTAAATCAGACGTCTTCAGTTTTGGAGTATTGGTTTTAAAAATTATAAGTGGCCAGAAAAACTGTCGATTTCAGAATGGAGAAAATGAGGAGCACGTAGTAAGCACGGTTTGGAAAAACTGGACAAAAGGGACATTGGCAAATATTGTGGATCCAACGTTGATGGAGGATGCTGGGTCAAGAAGTGAAATAATGAGATGCATCCACATAGGGTTACTGTGTGTTCAAGAAAATGCAGAACACAGGCCAACAATGGCTTCCATTGTTCCAATGCTGAGTACTCATTCCATCACTCTTCCTGTTCCTTCAGAACCTTCATTTTATATCTGGAGAAGTTTACCAGGAATCAAATCAGCCGGATCAGTAAATCAGCTTTCAGTTTCAGAGCAATATCCTCGGTAG 2982 0.4376 MVSPRLISPLFFFLILNLTLISHHGTNAQQNFLKFFCGNSTVDDDTTNSTFKTNLKSLLFNISSDTNIDYGFYNFSSGPNSDKVNVIGLCRGDVKVQDCRSCLTDSRVVLLQVCAPNVREAIGWYDNCFLRYSNRTIFGVMQTQPYFYLWNTQDALQKDQFKFVVTALMKFLREKAASGDSVRKFAAANATGPSNQTIYGLAQCTPDFSSKDCNNCLNGAISEIPQCCDGMKGGRVVRPSCNIRYETYSFFDPAASQSFTSPPLPQSPPAVLDYVPKQGKCNSPRAIIAVGVPIIVLLAVLIFVGLLKARRAKNIATNRSTNISCSELKNEVQKVKVQQEQSKLQQQQMNVALAFLLQHFEGQLPSELVTTGAIAQSNFLKLNCIGTTDDSNSTFQTNLKNLLMYISNTQIDYGFYNFSSGSKSDRVNAIALCRGDVKEPDCRSCLTDSRVVLLQVCPNVKEAIGWYDNCFLRYSNRTIFGLMETSPYFYWSDTHDVLEKDQFKSVVTKMMNLLRDKASSGNSIRKFAVANATGPSNQTIYGLVQCTPDLSQNACRACLNVTISEIPKCCNGMKGGGVLQPSCSIIYETYLFFDLAAAQPFISLQSSPSPLLPLLLQRHPRKVSIFACRKRNTTGIVVAIVVSTVAFIALVIFIVIIKARRLKNTIRTGEDEDEIMTVDFSDANKLGQGGFGPVYLGRLYNGQEIAVKRLSRDSGQGEMEFKNEVLLVAKLQHRNLVRLLGFCLKKKEKLLIYEFVANKSLDCFIFDSVKRVKLNWEKRYKIIEGIAKGLVYLHHDSRIRIVHRDLKASNVLLDKEMNAKISDFGMARLFAVDQTQAKTSTVVGTYGYMAPEYVMNGMFSTKSDVFSFGVLVLKIISGQKNCRFQNGENEEHVVSTVWKNWTKGTLANIVDPTLMEDAGSRSEIMRCIHIGLLCVQENAEHRPTMASIVPMLSTHSITLPVPSEPSFYIWRSLPGIKSAGSVNQLSVSEQYPR 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3637g00003 993 FunFam Cysteine-rich receptor-like protein kinase 10 145 250 - -
Pral3637g00003 993 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Pral3637g00003 993 Pfam Protein tyrosine and serine/threonine kinase 684 951 IPR001245 GO:0004672|GO:0006468
Pral3637g00003 993 ProSiteProfiles Gnk2-homologous domain profile. 377 479 IPR002902 -
Pral3637g00003 993 SUPERFAMILY Protein kinase-like (PK-like) 671 952 IPR011009 -
Pral3637g00003 993 FunFam Os08g0179000 protein 671 755 - -
Pral3637g00003 993 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 369 971 - -
Pral3637g00003 993 FunFam cysteine-rich receptor-like protein kinase 10 756 959 - -
Pral3637g00003 993 CDD STKc_IRAK 686 952 - -
Pral3637g00003 993 SMART serkin_6 680 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3637g00003 993 Gene3D - 376 478 IPR038408 -
Pral3637g00003 993 Gene3D - 487 592 IPR038408 -
Pral3637g00003 993 Gene3D - 143 250 IPR038408 -
Pral3637g00003 993 Gene3D - 29 136 IPR038408 -
Pral3637g00003 993 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Pral3637g00003 993 ProSiteProfiles Protein kinase domain profile. 680 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3637g00003 993 Gene3D Transferase(Phosphotransferase) domain 1 756 959 - -
Pral3637g00003 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Pral3637g00003 993 Coils Coil 325 345 - -
Pral3637g00003 993 Pfam Salt stress response/antifungal 37 134 IPR002902 -
Pral3637g00003 993 Pfam Salt stress response/antifungal 157 248 IPR002902 -
Pral3637g00003 993 Pfam Salt stress response/antifungal 500 590 IPR002902 -
Pral3637g00003 993 Pfam Salt stress response/antifungal 388 476 IPR002902 -
Pral3637g00003 993 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 377 479 - -
Pral3637g00003 993 ProSiteProfiles Gnk2-homologous domain profile. 485 592 IPR002902 -
Pral3637g00003 993 Gene3D Phosphorylase Kinase; domain 1 663 755 - -
Pral3637g00003 993 FunFam Cysteine-rich receptor-like protein kinase 10 487 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3637g00003 Pral-Chr3637 67028 78331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3637g00003 392 968 Receptor kinase-like Gene Family AT4G38830 46.600 1.98e-174 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3637g00003 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3637g00003 - - gmx:100791056 691.419