Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3637g00001 ATGGAAACATCACCGAGTTACAATTCGTCAGACAGCTCCGACGCTTTGGAGAAAGACGAGTTCAAGAATGTGTTGATGCAGATGATGAGTTATCTGAGAGAAAGGGCTGCTTCTAGAGACTCGTTTCGAAAGTTTGCAGTGGCGAATGTTAGTGGTCCGGGCAATCAACCATCTGAAGCTAATGATGCTGCCGACTCATTGCAAATGGACTTTGAAACCATCAGAATGGCAACAAATGATTTTGCTGATGCAAATAAGCTTGGACAAGGTGGATTTGGAGCCGTTTACTTGGGTAGGTTGTATGATGGACAAGAGATTGCTGTAAAAAGGTTGAGCAGGAATTCTGGCCAAGGTGATGTGGAGTTTAAGAATGAAGTGTTGCTAATGGCCAGGCTACAACATCGGAATTTAGTCAAGCTAGTTGGTTTTTGTCTCAAGAAAGAAGAAAGGCTTCTCGTTTATGAGTTCCTTCCTAACAAAAGCCTTGATTACTTCATTTTTGAGAGCATGTTAAATTGGCAAAAGCGTGTCAAAATTATAGAAGGCATTTCTCGAGGTCTTCTTTATCTCCATCAAGATTCTCGAGTACAGATCATTCACCGTGATTTAAAGCCAAACAACATACTTTTAGATGAAGACATGAATGCTAAGATCTCAGATTTTGGTATGGCAAGGTTGTTTGCAGTCGATCAAACTCAAAGCAACACAAGTACAATTGGGGGACTTAGTAATGGATACATGGTACCAGAATATGCAAAACATGGAATCTTTTCAACAAAGTCAGATGTTTTTAGTTTCGGAGTATTGGTTTTAGAAATTGTAAGTGGTCAAAAGAATGGTGAATTCCACAATGGGGAGAACATAGAGCATATAGGAACTGCTGCTTGGAAAAGTTGGAGTAAAGGAATGTATTCAAATATTGCAGATCCAACATTATTGATTGAAGAAGAAGGATCTTCAAGAAGTGAAATGATGAGATGCATCCAAATATGTTTACTATGTCTTCAAGAAAACGCAGCAGCTCATAGGCCATCAATGGCTTCCATTGTTACGTTGCTAAGTAGCTCCTCCTGTACCATCCCAATTCCTTCAGAACCATTCTTTTATAATTGGACAAGCATGCCAAGTATTAAGATTATTCCATCGTCATCATCTGGAGATCAATCTGTTGAAGAATCGAGAAATGAACTTACTTTTACAGAGCAATTTCCTCGCTAG 1218 0.3933 METSPSYNSSDSSDALEKDEFKNVLMQMMSYLRERAASRDSFRKFAVANVSGPGNQPSEANDAADSLQMDFETIRMATNDFADANKLGQGGFGAVYLGRLYDGQEIAVKRLSRNSGQGDVEFKNEVLLMARLQHRNLVKLVGFCLKKEERLLVYEFLPNKSLDYFIFESMLNWQKRVKIIEGISRGLLYLHQDSRVQIIHRDLKPNNILLDEDMNAKISDFGMARLFAVDQTQSNTSTIGGLSNGYMVPEYAKHGIFSTKSDVFSFGVLVLEIVSGQKNGEFHNGENIEHIGTAAWKSWSKGMYSNIADPTLLIEEEGSSRSEMMRCIQICLLCLQENAAAHRPSMASIVTLLSSSSCTIPIPSEPFFYNWTSMPSIKIIPSSSSGDQSVEESRNELTFTEQFPR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3637g00001 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Pral3637g00001 405 SUPERFAMILY Protein kinase-like (PK-like) 70 382 IPR011009 -
Pral3637g00001 405 FunFam Cysteine-rich receptor-like protein kinase 10 46 156 - -
Pral3637g00001 405 Gene3D Phosphorylase Kinase; domain 1 49 156 - -
Pral3637g00001 405 Pfam Protein tyrosine and serine/threonine kinase 85 351 IPR001245 GO:0004672|GO:0006468
Pral3637g00001 405 MobiDBLite consensus disorder prediction 382 405 - -
Pral3637g00001 405 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 30 382 - -
Pral3637g00001 405 ProSitePatterns Protein kinases ATP-binding region signature. 87 109 IPR017441 GO:0005524
Pral3637g00001 405 Gene3D Transferase(Phosphotransferase) domain 1 157 359 - -
Pral3637g00001 405 CDD STKc_IRAK 87 353 - -
Pral3637g00001 405 SMART serkin_6 81 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3637g00001 405 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 157 362 - -
Pral3637g00001 405 ProSiteProfiles Protein kinase domain profile. 81 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3637g00001 Pral-Chr3637 1742 5115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3637g00001 55 368 Receptor kinase-like Gene Family AT4G23230 55.312 3.45e-126 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3637g00001 PK_Tyr_Ser-Thr 7.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3637g00001 - - qsa:O6P43_031179 416.772