LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral362g00003	ATGACTACAAATTTGATTCCTAGACTTAATCTTGAATTTGATGATATAAAAGAATCATGGGAATTTTGGAAAGCATATGGGAGAAGAACTGGCTTTGGTGTTCGAAAGCAGAAGTTTAACAAAACTAAAAATGATAAGTCAATATATTCTTCTTATCTATATGTTTGTAATAAAGAAGGGGTCAGAAAACCAGATAAACGAGATGTGCGAACTAGGAAGCCCAGAGATGAGACAAGAACAGGATGCGAAGCTAGAATGAAAGTTAAGCTGGTAGATGGAAAATACAAAATTATTGAAGTTGTTCTAGATCATAATCATCCTTTTCAGCCCCCCGAAGCTGTTCATCTATTTGCATCACATCGAGGGATAACACCGGCTCAACAACATGAATTCGAAACTGCTGAAAAAGCTGGGATTAATCAAAAATCGGCATTCAATTTACAAAGCCAGTATGCAGGAGGTCGAGATAATTTGGGATATACAAGAGATGATGTTAAACATTATCTTAACTCAAGAAGGCAACGAGCTATGAAATATGGTGATGCTGGATGTATATTTCGTTATTTTGAGCAACAATTGGCAGAAAATCCATCCTTTTTCCATGCTTACCAAATGGACTCAGAGGAGCGAGTCACAAATGTGTTTTAG	648	0.3642	MTTNLIPRLNLEFDDIKESWEFWKAYGRRTGFGVRKQKFNKTKNDKSIYSSYLYVCNKEGVRKPDKRDVRTRKPRDETRTGCEARMKVKLVDGKYKIIEVVLDHNHPFQPPEAVHLFASHRGITPAQQHEFETAEKAGINQKSAFNLQSQYAGGRDNLGYTRDDVKHYLNSRRQRAMKYGDAGCIFRYFEQQLAENPSFFHAYQMDSEERVTNVF	215

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral362g00003	215	Pfam	FAR1 DNA-binding domain	21	109	IPR004330	-
	Pral362g00003	215	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	4	162	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral362g00003	Pral-Chr362	30848	31495	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Pral362g00003		FAR1	4.1e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral362g00003	-		-	pcin:129292420	284.263