Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3629g00028 ATGTCCTCCTCGCAGCCAAACGATTTTGTCGAAGATGATACCAGTACTGCACTGGATGCTTCCTTGCTCGTCACTAGCAAGTACGGTCGGCTATGGCGTCGGAGCTTGTACATTCGAATCTTCATATCTCGCAAGCGAACGACCACAACTACTACTGCCACACGCGAATCTGAACAATTATCTCAGTACACGTCATTACCCCCGTCCCCATCACTTCCCACGAGAACTTCCTCGGCTAAATCTTCTTGTGCGATTGATGTTCCCTCTGATAACGAAGAGGAGGATATTTTGCGTTTGGAACAGCGCATCAAAAGCGATATTGCTGGTATCGTGAAGCGCAAGGATTTGGACTCGCTTCGTGAGCTCGGGGGAGTCGACCGTGTTCGTTCAGTTCTTAGTCGTCGTCAATCAGAGGAGAGCAATATTAATAATGGGAACCATCAAGTGTTGGAGGCCACTAACCAAGGTCATGGACTGAGCCTCTCGTGCTGTTTTGTCAATAGTTGCAGACGCAATAGTTACACAATTTCATTACTCATGATCTCAGCTCTGTTGTCCTTGGCCATAGAGATCAAGCTGGAAGGACCTAAATATGGTTGGCATGATACTGCAGCTGTACTTGTTGCGATAATCATGATTATCTCTTTCTCTTCTGTGCAAAGCTTTTGGCGTGAAAGAAAGATGCTAAAATTGTCACAGAAGAAATGCAAGTTGAAATTTACTGTTGTTAGAGGCGGAACTCTCCAAACGGTGGACATATCAGATATTATGGTTGGTGATACAGTGTGTCTTAAGATGGGTGACGAGGTTCCAGCTGATGGTTTGCTTCTAAATAATGAAAACTCTGTGCTGGATGAGACACAGGATCCATTTCTCTTGTTTGGTTCAAAAATATCTTTTGAGGGTGAAACTTCGATGCTTGTAACATCAGTTGGAAACAGAATATCAGTTGAGATGCAGAATTCGGCAGCAAATAATCCTGAAAAGATTATGCTGTTGGAAAGTCGAATTGAGAAGCCGATTTCTTTCATTCACAAAGTTGCCCTTCTTATCTCTGTGTTGGTTATGCTTGTGGTGCTCATTCGCCTGCTTCGCAAGAAAAATGGGGACAACAGTGGGTTACCAGAAATGAAGGGTAAGGTTTCAGTTGACTTCCTGATAAAATTGATGGAGAGAATTTTCTTGAAACCCCAAGGAAAAGTTTCCATTTTAACTAGCCTTATAACTGTTGCAATAATAAGTATGCAACATGGGGTGCCACTTATGGTTACGATTTCTCTGAAATACCAAATGGACAAGGTGGTATCAAACCAAGTTGCAGATCTTCATGATTTATCGTCTTGTGCAACAATGGGACTGGTTACAGTCATCTGTGTTGATGCATCTGGTGGGCTAATGTCTAAACCGATGGAGGTTAGTAGAATTCGGATTGGGGAGAGAGATATCAGCAATGATATGACATCAGAAATTAATGAAGTTGTGCTCGACAAACTTAAGCAAGGAGCCAGCGTATCTGTTCTTGCCCCGGAGTTTATTCTTTCTCCAGTGTCCAATTCACTTATTTCTTGGGCAGAAACCACTTGGGGCGTGAACAGAGAATCTTTTGGTGAGAACCTTACCATTCTTCAGCATAGCAAACAAAATGCTCAGGGAAAGGGAAATGGAGTTTTGGTGAGAAAAGTTGGAGACCATGAAAAAGATCTGCACTCGCACTGGAGTGGAGCAGCGTCTACAATACTGGAAATGTGTTCACACTATTATGATAGTAATGGCGAATACCATGGCATAACAAATCAGAAAATCAAATTTGGGGAAGTCATTAAAGAAATGGAGGATAGCGGCCTTGAGCCTATTGCACTTGCTTATCAAAAGACTGAGGCTCAGGAACTTCAACGAGATGGTCTAATCTTGCTAGCTCTGGTGGGTCTCAAACGCTCATTCTTTGAAGAGACAAGATCAGCCTTGACAGACCTAAAAAATGAAAGAATCAAGATCAAATTAGTGTCAGGGCATGACATTGTGGCAGTGAAAGCCTTAGCTTGTGAACTAGGAATAGAAGTTCCCGCTGAAGATGGTTTTATTCTTCAAGGAAAAGAAATTCAAGATTTAAATGGCCCAGCCAGGTCAAAGAAGTTGGATGAAGCACTGGTAATGGGAGGTTTCCTTCCTGATCACAAGGTTCTCATGATTAGGTGTTTGCAAGATGAGGGTGACGTGGTTGCATTCTTTGGAGGATTGACATTAAATGACCCTGCAGTTCGAGAGGCAGCTGATATAGTGATCGATGCTAAGTCTCAGAACCTGAAATCTGATATGGAGAGTTCAAATGTATCTATTGAATGTTTCAGTGCAATAACTACAATTGTGAGGGCTGGGAGATGTCAATATCACAACATTCAAAAGTTCATTCAATTTCAGCTCACAACTAACTTATCTGGGTTATTCATAACCTTGATTACAACAATGTGCACCGGACAGTCTCCCCTAACGGCCATCCAGTTGATTTGGGTGAACTCGATAGTGTGCATTTTGGGAGGCCTAATGATGTTAATGAATTTAGACATCAGGGAAGATCAGCATGCTAACCAACCAAATAACCGGAAGCAGTCACTTATAACCCAAGAAATCTGGAAAGACATAGCCATTGATGTCTTGCTGCGGGCTTCTGTTTCTATGATATTTCTTTTTGGAGGACAAGTTACAGACAGCACAAAACAAGTTAGGAAGACTATGATCTTCAACATATTCATGTTATGTCAGGTCTTCAAGCAGCTCAACTTCTTGGGCCTAGCAATGAAGAAGGGAGTTTTCAAGATGGTTCCTCTGAGCTACTGTTTCTTGGTCGCATTAGGGGTTTGCCTGGTTATGCAGGTTCTGGTGATTCAATTTGCAAATAGCCTAGCAGATTGCATGAGCCTGAATGCAACTCAATGGGTTATCTGTTTCTTGGTTAGTTCTCTTTCATGGGTAATTGAGTGGCCACTGAAGAAGATTCTTACTTGGATATTTCATCATTTTTATCCCTAG 3027 0.4222 MSSSQPNDFVEDDTSTALDASLLVTSKYGRLWRRSLYIRIFISRKRTTTTTTATRESEQLSQYTSLPPSPSLPTRTSSAKSSCAIDVPSDNEEEDILRLEQRIKSDIAGIVKRKDLDSLRELGGVDRVRSVLSRRQSEESNINNGNHQVLEATNQGHGLSLSCCFVNSCRRNSYTISLLMISALLSLAIEIKLEGPKYGWHDTAAVLVAIIMIISFSSVQSFWRERKMLKLSQKKCKLKFTVVRGGTLQTVDISDIMVGDTVCLKMGDEVPADGLLLNNENSVLDETQDPFLLFGSKISFEGETSMLVTSVGNRISVEMQNSAANNPEKIMLLESRIEKPISFIHKVALLISVLVMLVVLIRLLRKKNGDNSGLPEMKGKVSVDFLIKLMERIFLKPQGKVSILTSLITVAIISMQHGVPLMVTISLKYQMDKVVSNQVADLHDLSSCATMGLVTVICVDASGGLMSKPMEVSRIRIGERDISNDMTSEINEVVLDKLKQGASVSVLAPEFILSPVSNSLISWAETTWGVNRESFGENLTILQHSKQNAQGKGNGVLVRKVGDHEKDLHSHWSGAASTILEMCSHYYDSNGEYHGITNQKIKFGEVIKEMEDSGLEPIALAYQKTEAQELQRDGLILLALVGLKRSFFEETRSALTDLKNERIKIKLVSGHDIVAVKALACELGIEVPAEDGFILQGKEIQDLNGPARSKKLDEALVMGGFLPDHKVLMIRCLQDEGDVVAFFGGLTLNDPAVREAADIVIDAKSQNLKSDMESSNVSIECFSAITTIVRAGRCQYHNIQKFIQFQLTTNLSGLFITLITTMCTGQSPLTAIQLIWVNSIVCILGGLMMLMNLDIREDQHANQPNNRKQSLITQEIWKDIAIDVLLRASVSMIFLFGGQVTDSTKQVRKTMIFNIFMLCQVFKQLNFLGLAMKKGVFKMVPLSYCFLVALGVCLVMQVLVIQFANSLADCMSLNATQWVICFLVSSLSWVIEWPLKKILTWIFHHFYP 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3629g00028 1008 Pfam Cation transporting ATPase, C-terminus 827 996 IPR006068 -
Pral3629g00028 1008 SUPERFAMILY Calcium ATPase, transduction domain A 239 312 IPR008250 -
Pral3629g00028 1008 MobiDBLite consensus disorder prediction 48 85 - -
Pral3629g00028 1008 Gene3D - 211 288 - -
Pral3629g00028 1008 Gene3D - 472 639 IPR023299 GO:0000166
Pral3629g00028 1008 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 555 643 IPR023299 GO:0000166
Pral3629g00028 1008 SUPERFAMILY Calcium ATPase, transmembrane domain M 174 1003 IPR023298 -
Pral3629g00028 1008 Gene3D - 779 1001 - -
Pral3629g00028 1008 PANTHER CATION TRANSPORTING ATPASE 105 998 - -
Pral3629g00028 1008 SUPERFAMILY HAD-like 618 845 IPR036412 -
Pral3629g00028 1008 Gene3D - 289 471 - -
Pral3629g00028 1008 Gene3D - 640 778 IPR023214 -
Pral3629g00028 1008 Pfam E1-E2 ATPase 239 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3629g00028 Pral-Chr3629 306395 310685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3629g00028 110 998 Primary Pumps ATPases AT3G63380 33.689 5.40e-134 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3629g00028 K01537 - gmx:102661547 854.744