Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3628g00003 ATGGCGATGGCGAAACAGCTTTGCCATTTTCACCATTTCTTCTTCGTTTTGCTCTTCTTTCTTGCCACCCGCCGTACACATCAGTTACAACATTCTCAGTCTTATGCCCTTCTGAAATTCCAGAAGCTTCTGGGGTACCCATCAGCTCTAAGCAGCTTGAGAAGTACGAGAGATTTCTGCAACATCGAGCCCACCAGCTATTTGACAATAGTCTGCTATGAGGACAATGTAACGCAGCTTCATGTTGTTGGTGATAGTGGGCTTTCTCCTTTGCCTCAAAATTTCTCTTCAGACTCTCTGTTTGCCACTTTGGGCACTCTTTCGAGCTTGAAAGTACTTTCTCTGGTTTCTATGGGTGTCTGGGGTCCCATACCTGAAAGCATTTCTCAACTGTCTTCTCTGGAGATTCTCAACATTAGCTCAAATCATTTTAGTGGAGCCATCCCAAACCAACTTTCTCTGTTGAAGAATCTGCAATCGTTGGTTCTTGGTGATAACGATTTCACAGGTGAAATTCCCACGTGGATAGGTTCGCTTCAAGGTTTAGCTGTGCTGAGTATGAGAAGAAATTTTCTTAGTGGGTCTGTACCAACTTCAGTTAATGATCTCCAAACTCTGAGGGTGCTGGATCTATCAAATAATCATTTACAAGGTGAACTGCCCGGCCTTAGTAATTTGAAAAATTTACAAGTTCTTAATCTGGAAAACAACACACTGGGACCCCATTTTCCTTCTCTACCCACCAAGTTAGTTTCATTAGTGCTTAGAAATAACAGCTTCCGGTCTGGTATACCTTCAAACTTAAGCTCTTACTACCAGCTTCAAAAGCTGGACCTTTCATTAAATGGATTTGTGGGACCATTCATACCGTCTTTACTTTCTCTGCCTTCCATCAAATACCTGGATGTTTCAACAAATAAATTTACTGGGATGCTATTCAGTAATTATTCTTGCAATTCTAATATCCTTTTTGTGAATCTATCCTCAAATCTCTTGAAAGGAGAACTTCCCAGTTGTTTGAAAGCAGAGAACGAAGTGGTTGCTTTGTATGCTAGGAATTGTTTTTCAAATGAGGATCAACATCAGCACCCTCCCACCTTCTGTCAAACTGAGGCTCTGGCAGTGAATGTAATGCCTCATGAACAGAAGCAGAGAAAAAGAACAACTGGTAAAGCGGTTCTTGTATCAAGCATGGGAGGAATTGTTGGAGGAGCCCTTGTTTTTGGAGTGGTTTTTTTGGTCGTTGCACGAGTAAACAAAAAGGGCTCTGTGAAAGCACCTGAAGGATCAACATTGGAGCAAGTTAAAAGCCAGATGAGTGAAAAGGATGATGAAGCTAAAACTCCCAGAACTGTTCTATCAGTAATGGAGAATATCATCAGCCGAGTCCCTAAGCCTAACAAGGAATCTGTGAGAACAATTGCACGATCGATGATGGAGCAAGTTGTTAACAGGGTTCATCACAGACATGTGAGACCTGCAAGGTCCATAGTAGAGCACGCCTCATCAGTGAACACAGCAAAACTGCTCACGGATGCAAGGTATATCTCCCAAACGATGAAGATGGGTACCAGCCTTCCTGCTTATAGGACGTTTGCTTTGGATGAACTCAAGGAGGCCACAAACAATTTTGATGCATCATGTTTTATAAGTGAAGGTGCGCGTGGTCAGATCTACAAAGGGTCACTCTCTGATGGAACTCAGATTGCTGTAAGAAGTTTGAAAATGAAGAAAAGACATGGCCCTCAGAGCTATATGCATCACATTGAATTGATTTCGAAACTGAGGCACCCACACTTGGTCAGTGCTCTAGGACATTGCTTTGAGTGCAACAACGATGATCCAAGTGTCAGCAGTATATATCTCATATTTGAGTTTGCACCATATAAAAGTTTAAGAGGCTGCATATCCGCAGGACCTTCTGGAGCAAAGCTTTCTTGGGCACAGAGAATAGCAGCTGCAATTGGAGTTGTTAAAGGCATTCAATTTTTGCACACTGGGACAGTGCCTGGATTGTACTCAAATAATCTGAAGATAACAGATATTCTACTGGATAACAATCTCAATGTCAAAATATGCAGCTATAATCTTCCTCTATTGGCTGAAAATAAGACCGTGGTGGGGAATGGAACTTTTTCCTCTGTAGTTAAAGGAAATGTTCAAGCAAGGACAAAGGATGGCGATAAAAATGATGTCTACGATTTTGGTGTAATCTTACTTGAAATCATTCTAGGACGTACAATCCTGTTCCATAATGAAGTTGGAACACTAAAGGATCTCTTACAAGTAAGCCTAGCAACTGATGATATAGCTAGAAGGAGCATTGTTGATCCAGTAATTCATAAGCAATGTTCAGATGAATCAATGAAGAGGATGATGGAGTTATGTGTGAGATGCGTCTCAGAAGATCCTACTGATAGACCTTCTGTGGAAGATGCTCTCTGGAATCTGCAGTTTGCGGCACAGGTTCAGAATTCATGGGGAAGAGACTCCATTGATACTGGAGAATCACCTGCTTCACCTGCCCAAGAAACACAAAGTTCCTAA 2547 0.4181 MAMAKQLCHFHHFFFVLLFFLATRRTHQLQHSQSYALLKFQKLLGYPSALSSLRSTRDFCNIEPTSYLTIVCYEDNVTQLHVVGDSGLSPLPQNFSSDSLFATLGTLSSLKVLSLVSMGVWGPIPESISQLSSLEILNISSNHFSGAIPNQLSLLKNLQSLVLGDNDFTGEIPTWIGSLQGLAVLSMRRNFLSGSVPTSVNDLQTLRVLDLSNNHLQGELPGLSNLKNLQVLNLENNTLGPHFPSLPTKLVSLVLRNNSFRSGIPSNLSSYYQLQKLDLSLNGFVGPFIPSLLSLPSIKYLDVSTNKFTGMLFSNYSCNSNILFVNLSSNLLKGELPSCLKAENEVVALYARNCFSNEDQHQHPPTFCQTEALAVNVMPHEQKQRKRTTGKAVLVSSMGGIVGGALVFGVVFLVVARVNKKGSVKAPEGSTLEQVKSQMSEKDDEAKTPRTVLSVMENIISRVPKPNKESVRTIARSMMEQVVNRVHHRHVRPARSIVEHASSVNTAKLLTDARYISQTMKMGTSLPAYRTFALDELKEATNNFDASCFISEGARGQIYKGSLSDGTQIAVRSLKMKKRHGPQSYMHHIELISKLRHPHLVSALGHCFECNNDDPSVSSIYLIFEFAPYKSLRGCISAGPSGAKLSWAQRIAAAIGVVKGIQFLHTGTVPGLYSNNLKITDILLDNNLNVKICSYNLPLLAENKTVVGNGTFSSVVKGNVQARTKDGDKNDVYDFGVILLEIILGRTILFHNEVGTLKDLLQVSLATDDIARRSIVDPVIHKQCSDESMKRMMELCVRCVSEDPTDRPSVEDALWNLQFAAQVQNSWGRDSIDTGESPASPAQETQSS 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3628g00003 848 Gene3D Ribonuclease Inhibitor 32 150 IPR032675 -
Pral3628g00003 848 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 628 833 - -
Pral3628g00003 848 Gene3D Phosphorylase Kinase; domain 1 515 621 - -
Pral3628g00003 848 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 101 196 - -
Pral3628g00003 848 Gene3D Ribonuclease Inhibitor 246 363 IPR032675 -
Pral3628g00003 848 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 63 829 - -
Pral3628g00003 848 Gene3D Transferase(Phosphotransferase) domain 1 629 834 - -
Pral3628g00003 848 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 248 373 - -
Pral3628g00003 848 MobiDBLite consensus disorder prediction 828 848 - -
Pral3628g00003 848 ProSiteProfiles Protein kinase domain profile. 544 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3628g00003 848 Pfam Protein tyrosine and serine/threonine kinase 550 812 IPR001245 GO:0004672|GO:0006468
Pral3628g00003 848 Gene3D Ribonuclease Inhibitor 151 245 IPR032675 -
Pral3628g00003 848 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 518 626 - -
Pral3628g00003 848 SUPERFAMILY Protein kinase-like (PK-like) 522 819 IPR011009 -
Pral3628g00003 848 ProSiteProfiles Leucine-rich repeat profile. 205 227 IPR001611 GO:0005515
Pral3628g00003 848 Pfam Leucine Rich repeats (2 copies) 205 239 IPR025875 -
Pral3628g00003 848 MobiDBLite consensus disorder prediction 425 448 - -
Pral3628g00003 848 SUPERFAMILY RNI-like 94 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3628g00003 Pral-Chr3628 25107 30375 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3628g00003 495 831 Miscellaneous Gene Families AT3G03770 60.059 2.05e-134 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pral3628g00003 PK_Tyr_Ser-Thr 6.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3628g00003 - - gmx:100797327 1125.54