Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3620g00077 ATGCTTTTTCTAATCGCCCTTCTCTTTATCCCTTTCATCTTCTTCTACCTTCTTCATAAACAAAGAACCACCGCCTCGCTTAACATCCCTCCTGGTCCTCCAGGCCTTCCTCTTATCGGCAACCTTCATCAGCTTCCGAGCTCTGACCTTCACCTCCACCTATGGCGTCTCTCCAACCACTACGGCCCTCTCATGCACTTGCGCCTCGCTTCCATACCAACTCTGGTTGTTTCCTCCGCAAAAATGGCTGAGCTCTTCCTCAAAACCCATGACCTCCAAATGGCCAGTCGCCCATCCTTGCTCGGTCAGAGGAAATACAGCTATGATTGTTCAGACCTGGTTTTTTCACCCTACGGCGATTACTGGAGAGAACTCAGAAAGCTCTGTGTCGTTCATTTGTTCAACACCAAACGTGTTCAGTCTTTTCGCTCTCTCCGGGAAGACGAAGTGCTCCGAATGATGAACAATATATCAAAGTCGGCTTCCCTGAATCAAGTCACAAACTTGAGCGAGGCGGTGATGCGTCTGACAAGCAGCATAATTTGCAGAGCTGCTTTTGGAAAGAGATATGAAGATGAAGGAAACAAAAGGAGTCAGTTTCATGGGATGTTGAATGAAGAACAAGCCATGATCGCTGCGTTTTACTTCACAGACCATTTACCTTTCATCGGGCACTGGATTGATAGGCTCAGGGGATTATTATCGCGGCTCGAAAAAAACTTCACGGAATTGGATAATTTCTTCCAGCAGATCATCGATGATCACATCCATTCAAAAGCACGAAAATCCGACCAAGAAGAAGACTTCATCGATGTCTGTCTTGGATTGACGAAGGATACATCTTCATTCGAACTCTCATTGACTAGCATCAAAGCCTTACTTACGGATATATTCATAGCTGGGACTGACACCGGGGCGGCGACGCTGGTATGGGCCATGACGGCTCTCATTAAGAATCCAAGAGTGATGAATAAAGTCAAAGAAGAAATCAGAAATTTAAAGCCGAGAAAAAGCTTCATTGACGAAGATGATCTCCAAAGGCTTCCTTATCTGGAGGCGGCAGTGAAGGAGACACTGAGAATGTACCCACCAGCGCCATTAATGGTACCGAGGGAAGCGACTGAGAAATGCCAGATCGGTGGGTATGACATAGAAGACAAGAGTGTGATATATTTCAACGTGTGGGCCATAGGGAGGGACCCAGAGGCATGGGAGCAGCCAGAAGAGTTCAATCCAGAAAGATTTGAAGGTAGGTCTGTGGATTTCAGCAAGGGACAAGGATTTGGGTGGATACCGTTTGGAGGAGGAAGAAGAATATGTCCAGGAATACAACTGGGAGTTGTAACAGTGGAGCTAGCACTTGCTAATTTACTCAACTCTTTCGATTGGGAACTCCCCAAAGGGATGAAAGTGGAGGACATAGACACTGATGTTCTTCCTGGAATCGCCATGCACAAAAAGAATGCTCTTTGCCTTATGCCCAAGAAATTACAGGACTGCATAGTTTAG 1509 0.4632 MLFLIALLFIPFIFFYLLHKQRTTASLNIPPGPPGLPLIGNLHQLPSSDLHLHLWRLSNHYGPLMHLRLASIPTLVVSSAKMAELFLKTHDLQMASRPSLLGQRKYSYDCSDLVFSPYGDYWRELRKLCVVHLFNTKRVQSFRSLREDEVLRMMNNISKSASLNQVTNLSEAVMRLTSSIICRAAFGKRYEDEGNKRSQFHGMLNEEQAMIAAFYFTDHLPFIGHWIDRLRGLLSRLEKNFTELDNFFQQIIDDHIHSKARKSDQEEDFIDVCLGLTKDTSSFELSLTSIKALLTDIFIAGTDTGAATLVWAMTALIKNPRVMNKVKEEIRNLKPRKSFIDEDDLQRLPYLEAAVKETLRMYPPAPLMVPREATEKCQIGGYDIEDKSVIYFNVWAIGRDPEAWEQPEEFNPERFEGRSVDFSKGQGFGWIPFGGGRRICPGIQLGVVTVELALANLLNSFDWELPKGMKVEDIDTDVLPGIAMHKKNALCLMPKKLQDCIV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3620g00077 502 Pfam Cytochrome P450 30 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 Gene3D Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 SUPERFAMILY Cytochrome P450 30 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 CDD CYP71-like 61 490 - -
Pral3620g00077 502 PANTHER CYTOCHROME P450 71B11-RELATED 15 495 - -
Pral3620g00077 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Pral3620g00077 502 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 FunFam Cytochrome P450 83B1 17 493 - -
Pral3620g00077 502 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3620g00077 502 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3620g00077 Pral-Chr3620 415170 417088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3620g00077 2 499 Cytochrome P450 AT3G26300 43.912 6.33e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3620g00077 - - csin:114286639 613.609