Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3620g00072 ATGGCTTCAACGGCTAGTTTTCTGTGGTTCTTCTTCGCGTTGGCCTCTTTCTTGTGCTGTGCTGAGTCCTTGTCGGAGATCCAAGCACTAATGGCTTTCAAGCTTCGACTCCATGACCCCCTCGGCTCCTTGGACGGCTGGGATCCCTCCACGCCCTCCGCTCCTTGTGACTGGCGTGGCATTTTCTGTTACAATAACCGGGTTCGCGAGCTTCGCTTGCCTCGCCTTGAACTCGCCGGTCCGCTCTCGGATTCCCTCTCCGACTTGGTTCAACTTCGCAAGTTAAGCCTTCATTCTAACAACTTCAATGGCTCCATTCCTCCTTCCCTCTCTCAATGCCTGCTTCTGCGTTCCGTTTATCTTCATAATAACTCCTTTTCTGGTAAACTGCCCCCGGCTCTTCTCAACCTCACCAACCTTCAAATCCTCAACGTTGCTCGGAACTTTCTTTCCGGCCGAATCCCCGGAGATTTATCGAACTCTCTCCGGTTCCTTGATTTATCGTCGAATGCATTTTCCGGTGATATTCTGGCTAATTTTTCGGCAAAATCTCAGCTACGACTCATCAACTTGTCCTACAATCGGTTATCTGGTAGAATACCGGGCTCTGTAGGGGTTCTGGGGCAGCTTGAGTATCTTTGGCTGGACTCCAACCAGTTGTATGGGACCCTGCCTTCGGCTCTGGTTAACTGCTCTTCTCTTGTGCATCTGACCGCCGTGAGCAATGCGCTTTCCGGTTTGATTCCGGCGACCATGGGGACGATGCCGAGACTTCAAGTTCTGTCGTTGTCGTCGAATCAACTTTCGGGATCGGTCCCCACTTCTCTGTTTTGCAATGTCCACTTGGCCAATGCTTCTTCGCTGAGAATCGTTCAACTAGGCTTTAATGCACTCACGGGCATTTTCGAGCCGCCAAATGCAAGGTGTGTTAATGTTTTGGAGGTTTTAGAGCTTAAGGAGAATCGTATTCGCACTGCATTTCCCTCCTGGTTGACTAATGCGACGTCGTTAAGAGCTGTTGATTTTTCCGGAAACTACTTTTCTGGTATTTTGCCGGCGGATATTGGGAATATATTGGGGCTAGAGGAGCTTAGGTTGGCAAACAATTCGTTATCTGGTGATGTTCCTCATGAAATTGTGAAATGTACTTTGTTACAGGTTCTTGATCTTCAAGGAAATCAATTCTCCGGCCTCATTCCTTCGTTTCTTGGCCAACTGAGGAATCTCAAAATGTTATCTCTTGGCGATAACCTGTTTACTGGTCCTATACCCACGAGTTTGGGAACACTTTCCGAGCTCGAGTCGTTGAACTTGAGCAACAATAAACTTACGGGATTCATTCCCCCGGAATTAATGCGATTGGGTAACATGAGTGCTTTGAATCTCAGTAACAACAAATTTTCAGGGCAACTTTCGTCTGCCATCGGGGATTTAACAGCTCTGCAGGTTCTGAATTTGAGTCATTGTGGGTTATCAGGACAGGTTCCGGCTAGTGTTGGTGGTTTAATGAAACTAACGGTGCTGGATTTAAGTAGGCAAAATCTTTCAGGTGACTTGCCAATCGAGCTCTTCGGATTACCTAGCCTGCAGGTTGTTGCTCTTCAAGAGAACCACTTATCTGGAGCTGTTCCAGAGGGTTTCAGCAGTCTAGTCACCCTGCAATATCTTAATATCAGCTCTAATGTCTTTGCTGGTGAAATTCCAGCGACTTATGGATTTCTTCGATCGTTAATTGTTCTTTCTGGGTCTCAGAATCATATTTCTGGCAGAATACCATCAGAGATTGGTAACTGTTCTCAGCTTGAAGTTCTCGAGCTTCGTTCAAATCGTTTGCATGCAGACATTCCTGGCTATATCGCCCGTCTTAATCGTTTAAGAGTCCTTGATTTGGGAGACAACAAGTTAACAGGAGATATTCCAGAAGAAGTATCCGAATGTTCTGCTTTGACTTCACTTCTCTTGGATGCTAATCAAATAACGGGTCAAATACCAGAATCCTTATCAACTTTATCAAACCTGAATGCTTTGGATCTCTCCTCAAATCAATTGAGCGGAGACATTCCAGCCAGCCTGTCACTCATCTCTGGTTTGAAGTATCTAAACGTCTCTAGAAATAATCTTGAGGGTCAGATTCCGGAAATGCTGGGCTCCCGATTCGATGATCCTTCTGTATTTGCAATGAATAACAGGTTATGTGGAAAACCACTGCATAGGGAATGTGCAAACGTAAGGCGGCGAAAGAGGAAGAGGCTAATAATATTTATAGGTGTGGCTCTTGGTGGACTATGCCTTTTGGGACTATGCTGCTGTGGCTATGTTTATAGTCTCTTACGGTGGCGCAATAAGCTGAGAGAAGGCGTAACAGGGGAGAAGAAGAAGAAGAGCCCTGCTCGTTCAAGTTCAGGAGCAGACAGAGGTCGAGGAAGTGGGGAAAATGGAGGGCCAAAACTAGTAATGTTCAATAACAAGATCACTTATGCTGAGACACTGGAAGCAACCAGACAATTTGATGAAGAGAATGTGTTGAGCAGAGGAAGATACGGTCTTGTGTTCAAAGCGTCGTACCCAGATGGAATGGTGCTGTCAATCCGTCGTCTTCCTGATGGATCCATCGAGGAAGGAACCTTCCGTAAAGAAGCAGAATCATTAGGAAAAGTGAAGCACCGCAATTTAACAGTATTGCGTGGCTATTACGCAGGACCACCTGACGTGAGGCTTCTTGTTTATGACTACATGCCCAATGGAAACCTTGGGACTCTTCTTCAGGAAGCATCTCAGCAAGACGGCCATGTACTTAATTGGCCTATGCGTCATCTCATCGCACTAGGCATTGCTCGTGGGCTAGCCTTCCTACATTCAGTCTCAATAGTTCATGGCGATGTGAAACCTCAAAATGTTCTGTTTGATGCTGATTTTGAAGCCCATTTATCAGAATTTGGCTTAGACAGAATAAAAATCGCAACCCCAGCAGAAGCATCGTCATCGTCCACTCCCATAGGATCATTGGGGTACGTATCGCCGGAAGCAGCGTTAACTGGGCAAGCGACCAAGGAAGCTGACGTCTACAGCTTTGGGATTGTATTGTTGGAGATTCTGACAGGAAGAAAACCGGTGATGTTCACGCAAGACGAAGACATAGTGAAATGGGTGAAAAGGCAATTGCAAAGGGGTCAGATATCGGAATTGCTTGACCCTGGGCTGCTAGAGCTAGACCCAGAGTCATCGGAATGGGAAGAGTTCTTGTTGGGGATCAAAGTGGCTCTTTTATGCACAGCACCGGATCCTCTCGATCGGCCGTCAATGACTGACATTGTTTTCATGCTCGAAGGTTGCCGGGTCGGACCGGAGATTCCGTCGTCGGCCGATCCCACCACGTTGCCTTCCCCAACTTGA 3393 0.4686 MASTASFLWFFFALASFLCCAESLSEIQALMAFKLRLHDPLGSLDGWDPSTPSAPCDWRGIFCYNNRVRELRLPRLELAGPLSDSLSDLVQLRKLSLHSNNFNGSIPPSLSQCLLLRSVYLHNNSFSGKLPPALLNLTNLQILNVARNFLSGRIPGDLSNSLRFLDLSSNAFSGDILANFSAKSQLRLINLSYNRLSGRIPGSVGVLGQLEYLWLDSNQLYGTLPSALVNCSSLVHLTAVSNALSGLIPATMGTMPRLQVLSLSSNQLSGSVPTSLFCNVHLANASSLRIVQLGFNALTGIFEPPNARCVNVLEVLELKENRIRTAFPSWLTNATSLRAVDFSGNYFSGILPADIGNILGLEELRLANNSLSGDVPHEIVKCTLLQVLDLQGNQFSGLIPSFLGQLRNLKMLSLGDNLFTGPIPTSLGTLSELESLNLSNNKLTGFIPPELMRLGNMSALNLSNNKFSGQLSSAIGDLTALQVLNLSHCGLSGQVPASVGGLMKLTVLDLSRQNLSGDLPIELFGLPSLQVVALQENHLSGAVPEGFSSLVTLQYLNISSNVFAGEIPATYGFLRSLIVLSGSQNHISGRIPSEIGNCSQLEVLELRSNRLHADIPGYIARLNRLRVLDLGDNKLTGDIPEEVSECSALTSLLLDANQITGQIPESLSTLSNLNALDLSSNQLSGDIPASLSLISGLKYLNVSRNNLEGQIPEMLGSRFDDPSVFAMNNRLCGKPLHRECANVRRRKRKRLIIFIGVALGGLCLLGLCCCGYVYSLLRWRNKLREGVTGEKKKKSPARSSSGADRGRGSGENGGPKLVMFNNKITYAETLEATRQFDEENVLSRGRYGLVFKASYPDGMVLSIRRLPDGSIEEGTFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVSIVHGDVKPQNVLFDADFEAHLSEFGLDRIKIATPAEASSSSTPIGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKRQLQRGQISELLDPGLLELDPESSEWEEFLLGIKVALLCTAPDPLDRPSMTDIVFMLEGCRVGPEIPSSADPTTLPSPT 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3620g00072 1130 ProSiteProfiles Protein kinase domain profile. 836 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3620g00072 1130 SUPERFAMILY L domain-like 20 302 - -
Pral3620g00072 1130 PRINTS Leucine-rich repeat signature 670 683 - -
Pral3620g00072 1130 PRINTS Leucine-rich repeat signature 433 446 - -
Pral3620g00072 1130 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 912 1116 - -
Pral3620g00072 1130 Gene3D Ribonuclease Inhibitor 457 743 IPR032675 -
Pral3620g00072 1130 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 385 1110 - -
Pral3620g00072 1130 ProSiteProfiles Leucine-rich repeat profile. 432 453 IPR001611 GO:0005515
Pral3620g00072 1130 SUPERFAMILY L domain-like 500 731 - -
Pral3620g00072 1130 Gene3D Ribonuclease Inhibitor 309 456 IPR032675 -
Pral3620g00072 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Pral3620g00072 1130 Gene3D Ribonuclease Inhibitor 23 181 IPR032675 -
Pral3620g00072 1130 ProSiteProfiles Leucine-rich repeat profile. 672 694 IPR001611 GO:0005515
Pral3620g00072 1130 SUPERFAMILY Protein kinase-like (PK-like) 815 1119 IPR011009 -
Pral3620g00072 1130 SMART serkin_6 836 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3620g00072 1130 FunFam Piriformospora indica-insensitive protein 2 351 448 - -
Pral3620g00072 1130 SUPERFAMILY L domain-like 284 540 - -
Pral3620g00072 1130 SMART LRR_typ_2 382 405 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 207 231 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 670 694 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 478 502 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 137 161 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 430 454 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 622 646 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 89 113 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 526 549 IPR003591 -
Pral3620g00072 1130 SMART LRR_typ_2 255 279 IPR003591 -
Pral3620g00072 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 272 - -
Pral3620g00072 1130 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Pral3620g00072 1130 Gene3D Transferase(Phosphotransferase) domain 1 912 1116 - -
Pral3620g00072 1130 Pfam Protein kinase domain 838 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3620g00072 1130 Pfam Leucine rich repeat 600 659 IPR001611 GO:0005515
Pral3620g00072 1130 Pfam Leucine rich repeat 385 443 IPR001611 GO:0005515
Pral3620g00072 1130 Pfam Leucine rich repeat 504 561 IPR001611 GO:0005515
Pral3620g00072 1130 Gene3D Ribonuclease Inhibitor 182 308 IPR032675 -
Pral3620g00072 1130 MobiDBLite consensus disorder prediction 788 816 - -
Pral3620g00072 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 179 - -
Pral3620g00072 1130 Gene3D Phosphorylase Kinase; domain 1 812 911 - -
Pral3620g00072 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 450 744 - -
Pral3620g00072 1130 FunFam Putative LRR receptor-like serine/threonine-protein kinase 799 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3620g00072 Pral-Chr3620 377960 381806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3620g00072 1 1129 Receptor kinase-like Gene Family AT1G75640 64.701 0.0 1374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pral3620g00072 Pkinase 1.9e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3620g00072 - - jre:108991311 1657.88