Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3620g00069 ATGGCTGAGTGGTTCTCTCTAGGTGGAAAGCAAGGCCCACAAACGAAGGTAGGAAAAGGAAAAGAAGATAACAGCAACAGCAATTGTCTATTCTTGTTGAGCGAGAAGGAGATCTGCAACAATAACAGCAACAAGGGATTCGAGATATGGACACAGTCTTATCACCATTCAAACCAATCCTTGAGCGACTGCTTCTCTCTTGGGGTGGGTCCTAGTTGCGCAAACTTGTTTGATGAGTCGAGGAGGTTTGGATTGACGGTGATGAGGTCTGGGGCTCTAGGAAGCGGCATGAATTGTCAGGATTGTGGGAACCAAGCCAAGAAAGACTGTCCTCATCTTAGATGCAGAACTTGCTGCAGAAGTCGAGGGTTTCAGTGCCAAACCCACGTTAAGAGCACCTGGGTTCCCGCCTCCAGACGCCGTGAGCGACAGCAACAGCAGCTACAACACCGGCAACTTCCCGGCGATACCTCCAAACGCGACAGAGAAACTCAAGGTGCAGCAGCTCTTGCTCGCATTCCTTCGCCTATCACCACCACAGGGTTGGAACTGAGCCAATTTCCTCACGAACTGAACTCACCAGCAATGTTTCAATGTGTGAAAGTTAACTCAATGGACACACCAGAAGAGCAGTACGCCTATCAAACTGCTGTTAACATCGGAGGGCATGTTTTCAAAGGAATCCTCTACGACCAAGGCCCTGATGGTCCATATAACGCGGGTGGTGATCGGAGCTCCTCCGCCGCAGCTGATGCTGATCAAAACCTTAATCTCATAACGGCCTCAACCACAGCAACTCCGGCCAGCGCCATCCCGTTTGATCCTTCAATCTACCCTAATATCCCATTTAATACTTTCATGGCTGGTACGCAATTCTTCCCACCACCAAGATCTTAA 897 0.4961 MAEWFSLGGKQGPQTKVGKGKEDNSNSNCLFLLSEKEICNNNSNKGFEIWTQSYHHSNQSLSDCFSLGVGPSCANLFDESRRFGLTVMRSGALGSGMNCQDCGNQAKKDCPHLRCRTCCRSRGFQCQTHVKSTWVPASRRRERQQQQLQHRQLPGDTSKRDRETQGAAALARIPSPITTTGLELSQFPHELNSPAMFQCVKVNSMDTPEEQYAYQTAVNIGGHVFKGILYDQGPDGPYNAGGDRSSSAAADADQNLNLITASTTATPASAIPFDPSIYPNIPFNTFMAGTQFFPPPRS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3620g00069 298 NCBIfam LRP1 C-terminal domain 186 234 IPR006511 -
Pral3620g00069 298 NCBIfam putative zinc finger domain, LRP1 type 98 140 IPR006510 -
Pral3620g00069 298 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 269 IPR007818 GO:0003700|GO:0006355
Pral3620g00069 298 Pfam Domain of unknown function (DUF702) 96 235 - -
Pral3620g00069 298 MobiDBLite consensus disorder prediction 135 174 - -
Pral3620g00069 298 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3620g00069 Pral-Chr3620 353000 355264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3620g00069 1 298 C2H2 Transcription Factor Family AT1G75520 41.690 8.93e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Pral3620g00069 DUF702 2.7e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3620g00069 - - pcin:129317944 495.738