Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3620g00068 ATGGATCTGCTACGGTCGGAGCCAATGCAACTCGTTCAGCTCATCATTCCCACCGAATCGGCTTACCGAGCTATCTCTTACCTTGGCGATCTCGGCCTCTGTCAATTCAAAGATCTTAATGCAGAAAAGAGCCCGTTCCAACGGACATATGCTGCTCAGATTAAAAGATGTGGAGAAATGACACGCAAGCTTCGGTTCTTCAAGGAACAAATGGCAAAGGCTGGTTTATCACCCTCGACAAGGTCAATGAGAGAGGGAGAAGTTGATCTGGACCATTTAGAGGTTAAACTTGCAGAGCTCGAAGCTGAGCTAATTGAGAATAATGTGAACAATGATAAGTTGCAACATAGTTACAGTGAGCTATTGGAGTATAAACTCGTTCTGCAGAAGGTTGGTGAGTTTTTCTCTCCAGCACAAAAAAGCGCAGTATCTCAACAGAGAGAACTTGGAGTTCAGAGCAGTTCCGAAGGGTCTATTGACAGCCCATTACTACAAGAACAAGAGATGACGACGGAAACATCAAAGCCAATTAAACTGGGTTTTACCGCTGGCCTTGTTCCAGGAGAAAAATCAATGTCTTTCGAAAGAATTTTATTTCGTGCCACCAGGGGTAACTTGTTTCTAAAACAAGCCATGATTGAACATCCTGTACTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGCGTTTCTTATCTTTTACTCTGGAGAAAGAGCTAATAGTAAAATTCTAAAAATATGCGACGCCTTTGGAGCAAATCGTTATCCTTTCACAGACGACTTGGGCAAACAGTTTCAGATGATTACAGAGGTATCTGGAAGACTTTCCGAATTGAAGACTACCATTGATGTTGGATTGCTACACAGGAGTACTATATTGCAGACAATTGGATATCACTACGAGACGTGGAGCCTTCTGGTGAAGAAGGTAAAATCCATTTATCACACTTTGAATATGTTTAGCATCGACGTGACAAAGAAATGTCTTGTTGCAGAAGGTTGGTGCCCTGTTTTTGCAACAAATCAGATTCAAGGTGCATTGCAGCGAGCAAGCATGGACAGCAAATCACAAGTTGGGGCTATATTCCAGGTTTTACACACAAAGGAATCACCACCTACCTATTTTCAGACAAACAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAGTACCGCGAGGCAAATCCTGGTGTTTTCACAATCATTACATTTCCATTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGTTTATTGCTGGCTACTTCATATTTCATTATCAGAGAGAAAAAATTTTCTGGTCAGAAACTTGGGGACATCGTGGAAATGACTTTTGGTGGCCGCTATGTTATTATGATGATGGCACTGTTCTCAATCTACACAGGATTGATATATAATGAATTCTTCTCTGTTCCATTTGAACTATTTGGGCCATCTGCCTATGGATGCCGTGATCCTTCATGCAGGGATGCTCGTACAACAGGTCTGATTAGAGTCCGACGAATTTATCCATTCGGTTTGGATCCTAAATGGCACGGTACTAGGAGTGAATTGCCATTTCTCAACTCTCTGAAGATGAAGATATCAATCCTACTGGGTGTGGCCCAAATGAATCTTGGAATTATGCTGAGTTACTATAATGCAAAATACTTTGGAAATGACATAAATATCTGGCACCAGTTCATTCCCCAAATGATATTTTTAAATAGTTTGTTCGGCTATCTTTCACTCCTCATTATCGTTAAATGGTGTACCGGATCTCAAGCTGACCTGTATCATGTGATGATATACATGTTCTTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTGGGCCAAAAGTTCCTTCAATCATTGCTGTACCTTGGATGCTATTCCCTAAACCCTTTCTCCTCAAGAAGCAACATCAAGAAAGACATCAAGGCCAATCTTACTCTTTGCTTCACGCCATCGATGAACCTCTTGAAAGAGAGCCGCACAGCGATACTGCTCACCACGAGGAGTTTGATTTCAGCGATGTTTTTGTGCACCAACTTATACACACAATAG 2082 0.4131 MDLLRSEPMQLVQLIIPTESAYRAISYLGDLGLCQFKDLNAEKSPFQRTYAAQIKRCGEMTRKLRFFKEQMAKAGLSPSTRSMREGEVDLDHLEVKLAELEAELIENNVNNDKLQHSYSELLEYKLVLQKVGEFFSPAQKSAVSQQRELGVQSSSEGSIDSPLLQEQEMTTETSKPIKLGFTAGLVPGEKSMSFERILFRATRGNLFLKQAMIEHPVLDPLSGEKVDKNAFLIFYSGERANSKILKICDAFGANRYPFTDDLGKQFQMITEVSGRLSELKTTIDVGLLHRSTILQTIGYHYETWSLLVKKVKSIYHTLNMFSIDVTKKCLVAEGWCPVFATNQIQGALQRASMDSKSQVGAIFQVLHTKESPPTYFQTNKFTSAFQEIVDAYGVAKYREANPGVFTIITFPFLFAVMFGDWGHGICLLLATSYFIIREKKFSGQKLGDIVEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRDARTTGLIRVRRIYPFGLDPKWHGTRSELPFLNSLKMKISILLGVAQMNLGIMLSYYNAKYFGNDINIWHQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFLQSLLYLGCYSLNPFSSRSNIKKDIKANLTLCFTPSMNLLKESRTAILLTTRSLISAMFLCTNLYTQ 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3620g00068 693 PANTHER VACUOLAR PROTON ATPASES 3 640 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral3620g00068 693 Coils Coil 83 117 - -
Pral3620g00068 693 Pfam V-type ATPase 116kDa subunit family 27 633 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral3620g00068 693 PIRSF ATP6V0A1 1 638 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3620g00068 Pral-Chr3620 342698 348575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3620g00068 1 625 Primary Pumps ATPases(2) AT4G39080 74.560 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3620g00068 K02154 - jre:109008274 1047.73