Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3620g00067 ATGGATCTGCTACGGTCGGAGCCAATGCAACTCGTTCAGCTCATCATTCCCACCGAATCGGCTTACCGAGCTATCTCTTACCTTGGCGATCTCGGCCTCTGTCAATTCAAAGATCTTAATGCAGAAAAGAGCCCGTTCCAACGGACATATGCTGCTCAGATTAAAAGATGTGGAGAAATGACACGCAAGCTTCGGTTCTTCAAGGAACAAATGGCAAAGGCTGGTTTATCACCCTCGACAAGGTCAATGAGAGAGGGAGAAGTTGATCTGGACCATTTAGAGGTTAAACTTGCAGAGCTCGAAGCTGAGCTAATTGAGAATAATGTGAACAATGATAAGTTGCAACATAGTTACAGTGAGCTATTGGAGTATAAACTCGTTCTGCAGAAGGTTGGTGAGTTTTTCTCTCCAGCACAAAAAAGCGCAGTATCTCAACAGAGAGAACTTGGAGTTCAGAGCAGTTCCGAAGGGTCTATTGACAGCCCATTACTACAAGAACAAGAGATGACGACGGAAACATCAAAGCCAATTAAACTGGGTTTTACCGCTGGCCTTGTTCCAGGAGAAAAATCAATGTCTTTCGAAAGAATTTTATTTCGTGCCACCAGGGGTAACTTGTTTCTAAAACAAGCCATGATTGAACATCCTGTACTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGCGTTTCTTATCTTTTACTCTGGAGAAAGAGCTAATAGTAAAATTCTAAAAATATGCGACGCCTTTGGAGCAAATCGTTATCCTTTCACAGACGACTTGGGCAAACAGTTTCAGATGATTACAGAGGTATCTGGAAGACTTTCCGAATTGAAGACTACCATTGATGTTGGATTGCTACACAGGAGTACTATATTGCAGACAATTGGATATCACTACGAGACGTGGAGCCTTCTGGTGAAGAAGGTAAAATCCATTTATCACACTTTGAATATGTTTAGCATCGACGTGACAAAGAAATGTCTTGTTGCAGAAGGTTGGTGCCCTGTTTTTGCAACAAATCAGATTCAAGGTGCATTGCAGCGAGCAAGCATGGACAGCAAATCACAAGTTGGGGCTATATTCCAGGTTTTACACACAAAGGAATCACCACCTACCTATTTTCAGACAAACAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAGTACCGCGAGGCAAATCCTGGTGTTTTCACAATCATTACATTTCCATTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGTTTATTGCTGGCTACTTCATATTTCATTATCAGAGAGAAAAAATTTTCTGGTCAGAAACTTGGGGACATCGTGGAAATGACTTTTGGTGGCCGCTATGTTATTATGATGATGGCACTGTTCTCAATCTACACAGGATTGATATATAATGAATTCTTCTCTGTTCCATTTGAACTATTTGGGCCATCTGCCTATGGATGCCGTGATCCTTCATGCAGGGATGCTCGTACAACAGGTCTGATTAGAGTCCGACGAATTTATCCATTCGGTTTGGATCCTAAATGGCACGGTACTAGGAGTGAATTGCCATTTCTCAACTCTCTGAAGATGAAGATATCAATCCTACTGGGTGTGGCCCAAATGAATCTTGGAATTATGCTGAGTTACTATAATGCAAAATACTTTGGAAATGACATAAATATCTGGCACCAGTTCATTCCCCAAATGATATTTTTAAATAGTTTGTTCGGCTATCTTTCACTCCTCATTATCGTTAAATGGTGTACCGGATCTCAAGCTGACCTGTATCATGTGATGATATACATGTTCTTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGTGGGCCAAAAGTTCCTTCAAATTGTGTTATTATTGTTGGCAGTCATTGCTGTACCTTGGATGCTATTCCCTAAACCCTTTCTCCTCAAGAAGCAACATCAAGAAAGACATCAAGGCCAATCTTACTCTTTGCTTCACGCCATCGATGAACCTCTTGAAAGAGAGCCGCACAGCGATACTGCTCACCACGAGGAGTTTGATTTCAGCGATGTTTTTGTGCACCAACTTATACACACAATAGAATTTGTTCTTGGTGCAGTATCTAATACAGCTTCATATTTACGTTTATGGGCTCTCAGTCTTGCCCATTCAGAGCTATCAAGTGTATTTTATGACAAAGTACTGCTTCTTGCGTGGGGGTTTAACAATATAGTCGTTATCATTATTGGCATTACTGTTTTCACATTCGCAACTGTTGGCGTGCTTCTGATAATGGAAACTTTAAGTGCGTTCTTGCACGCTCTGAGGCTTCACTGGGTAGAGTTCCAGAACAAGTTTTACGAAGGAGATGGCTACAAGTTCTGCCCGTTTTCATTTACTTCACTAAACGAAGAGGATGGATCATAG 2430 0.4111 MDLLRSEPMQLVQLIIPTESAYRAISYLGDLGLCQFKDLNAEKSPFQRTYAAQIKRCGEMTRKLRFFKEQMAKAGLSPSTRSMREGEVDLDHLEVKLAELEAELIENNVNNDKLQHSYSELLEYKLVLQKVGEFFSPAQKSAVSQQRELGVQSSSEGSIDSPLLQEQEMTTETSKPIKLGFTAGLVPGEKSMSFERILFRATRGNLFLKQAMIEHPVLDPLSGEKVDKNAFLIFYSGERANSKILKICDAFGANRYPFTDDLGKQFQMITEVSGRLSELKTTIDVGLLHRSTILQTIGYHYETWSLLVKKVKSIYHTLNMFSIDVTKKCLVAEGWCPVFATNQIQGALQRASMDSKSQVGAIFQVLHTKESPPTYFQTNKFTSAFQEIVDAYGVAKYREANPGVFTIITFPFLFAVMFGDWGHGICLLLATSYFIIREKKFSGQKLGDIVEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRDARTTGLIRVRRIYPFGLDPKWHGTRSELPFLNSLKMKISILLGVAQMNLGIMLSYYNAKYFGNDINIWHQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKFLQIVLLLLAVIAVPWMLFPKPFLLKKQHQERHQGQSYSLLHAIDEPLEREPHSDTAHHEEFDFSDVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNIVVIIIGITVFTFATVGVLLIMETLSAFLHALRLHWVEFQNKFYEGDGYKFCPFSFTSLNEEDGS 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3620g00067 809 PIRSF ATP6V0A1 1 809 IPR026028 GO:0000220|GO:0046961
Pral3620g00067 809 Coils Coil 83 117 - -
Pral3620g00067 809 PANTHER VACUOLAR PROTON ATPASES 3 806 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral3620g00067 809 Pfam V-type ATPase 116kDa subunit family 27 800 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3620g00067 Pral-Chr3620 341170 348575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3620g00067 1 807 Primary Pumps ATPases(2) AT4G39080 74.381 0.0 1257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3620g00067 K02154 - jre:109008274 1336.24