Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3620g00065 ATGGCTGAGTCAGGGTCCAAGAGAATGTGGTGTTCTGTTCCAGAGCGGCTTCAGCTGCATGTGGCCATGTTGGCCCTGCAGTTCGGATACGCAGGATTCCACGTCGTTTCAAGAGCTGCCCTCAACATGGGCATTAGCAAACTTGTTTTCCCAGTCTACCGTAACATCATCGCTTTGCTTCTCCTTCTTCCCTTCGCTTACTTCATCGAGAAGAAGGATAGGCCTGCGCTTAACTGGAACTTCGTCTTCCACTTCTTTCTTCTTGCACTCATCGGGATCACAGCAAACCAAGGGTTCTACTTGCTTGGCTTGGACAACACATCTCCGACCTTCGCATCAGCAATTCAGAACTCCGTACCTGCCATCACTTTTCTCATGGCAGCCATATTCGGGATTGAGAAAGTAAGGTGGAACCGAAGAGACGGGTTGGCCAAAGTGGCCGGAACTTTATTCTGTGTGGCCGGAGCAACCGTGATAACACTATATCAGGGTCCAACCATATACAGGCCAGCCCCACATCTCCAGAACACTTCAAGTTCAACATCTCTATTCGGGTCACTGGGGCTTGGAGATGCAAACGGAAAGAGCTGGGCCCTCGGGTGTATCTACCTCATAGGCCATTGCTTGTCCTGGTCAGGCTGGCTGGTGATGCAGGCACCAGTGCTCAAGAAGTACCCAGCTCGCCTCTCTGTCACTTCTTACACGTGTTTCTTTGGCCTCATTCAGTTTCTGGTCATCGCTTTGATCTTTGAAAGAGACGCTCAGGCTTGGGTTTTCCACTCTGGTGGAGAAGCTTTCACTATTCTTTACGCTGGAGTGGTGGCATCAGGAATTGCCTTCGCCGTTCAGATATGGTGTATTGACAGAGGTGGCCCAGTGTTCGTGGCCGTGTACCAACCAGTTCAGACCCTTGTTGTCGCCATCATGTCTTCCATTGCCTTAGGCGAAGAGTTCTATTTGGGCGGGATTATTGGAGCAGTGTTGATTGTGGTGGGATTGTATTTAGTGCTGTGGGGCAAAAGTGAAGAGAAGAAGCTTGCAAAGGAACAACTCGCGATTGTGTCTGCTCCAGAGCACGTTCCCAGGCCAATTACAAGCCACTCCAAGACCTCACTTACTCAGCCACTCATCCCTTCGTCCAACGAAAATGTCTGA 1155 0.5048 MAESGSKRMWCSVPERLQLHVAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFIEKKDRPALNWNFVFHFFLLALIGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAIFGIEKVRWNRRDGLAKVAGTLFCVAGATVITLYQGPTIYRPAPHLQNTSSSTSLFGSLGLGDANGKSWALGCIYLIGHCLSWSGWLVMQAPVLKKYPARLSVTSYTCFFGLIQFLVIALIFERDAQAWVFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMSSIALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKKLAKEQLAIVSAPEHVPRPITSHSKTSLTQPLIPSSNENV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3620g00065 384 Pfam EamA-like transporter family 199 337 IPR000620 GO:0016020
Pral3620g00065 384 Pfam EamA-like transporter family 23 160 IPR000620 GO:0016020
Pral3620g00065 384 MobiDBLite consensus disorder prediction 364 384 - -
Pral3620g00065 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 341 - -
Pral3620g00065 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Pral3620g00065 384 MobiDBLite consensus disorder prediction 362 384 - -
Pral3620g00065 384 PANTHER WAT1-RELATED PROTEIN 21 349 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3620g00065 Pral-Chr3620 327843 330191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3620g00065 1 384 Nodulin-like Gene Family AT1G75500 74.872 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3620g00065 - - gmx:100786714 623.624