Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3620g00050 ATGATGATGGGCTCGCCAAGTGGGAATTCGTGCTTGTCCAACACCAGATTCCATCAGAGTTTAGGATCTGAAGAGGAGTTGTTGCAGCTTGAGATGTTGGAGAGGAAGAGGAAGAGGATGGAAGCGAATCGTGAATCGGCAAGGCGATCTCGGGTGCGAAAGCAGAAGCACATGGACGATATGGCGGCGCAACTGGTTGAGCTGCGAAAGGAAAACAGCGAGCTCGTCGCCAGCATAAACATGGCGATGCAGATGTATCAGAATGTGGAGGCTGAGAATAGCGTTCTGAGAGCCCAGATAGCTGAACTCACCCAAACCCTTCGATCTCTGAATCATATCATCGACCTCGTCAGCACAAGAACAAGAAGCACCAGCGAGGCATCGTTGAACTTCGTGAATCCCATGAATATGTTTTCGAGTCACAGTCAACCCATAATGGCTTGTGCAGCAGACATGTTTCCATGTTGA 468 0.4957 MMMGSPSGNSCLSNTRFHQSLGSEEELLQLEMLERKRKRMEANRESARRSRVRKQKHMDDMAAQLVELRKENSELVASINMAMQMYQNVEAENSVLRAQIAELTQTLRSLNHIIDLVSTRTRSTSEASLNFVNPMNMFSSHSQPIMACAADMFPC 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3620g00050 155 CDD bZIP_plant_GBF1 36 87 IPR045314 GO:0003700|GO:0006355
Pral3620g00050 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Pral3620g00050 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 27 151 - -
Pral3620g00050 155 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Pral3620g00050 155 Pfam bZIP transcription factor 35 93 IPR004827 GO:0003700|GO:0006355
Pral3620g00050 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 96 IPR004827 GO:0003700|GO:0006355
Pral3620g00050 155 Coils Coil 86 106 - -
Pral3620g00050 155 Gene3D - 33 89 - -
Pral3620g00050 155 MobiDBLite consensus disorder prediction 38 57 - -
Pral3620g00050 155 FunFam BZIP transcription factor 33 84 - -
Pral3620g00050 155 SUPERFAMILY Leucine zipper domain 35 88 IPR046347 GO:0003700|GO:0006355
Pral3620g00050 155 Coils Coil 23 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3620g00050 Pral-Chr3620 247617 248765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3620g00050 32 149 bZIP Transcription Factor Family AT4G34590 47.328 2.65e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral3620g00050 bZIP_1 1.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3620g00050 K25786 - cave:132183296 133.265