Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3620g00028 ATGGCGTCGAGCTCGACTTGGACGGCGAAGCAGAACAAGAGATTTGAGAATGCTTTGGCGTTGTACCCCGAGGAGACGCCGGACCGGTGGCAGAAGCTGGCGAGAGCGGTGGGAGGGAAGACGGTGGAGGAAGTGAAGAGGCATTATGAGAAGCTTGTTGAAGATGTGAAGCTGATCGAGGAAGGCCATGTCCCTCTGCCTGATTACAATACAAACACTGAAGCATTACGAGGAGGACCGTCTTCCACCCTCAGAACTTACACTACTTACTTGGATCATCAGGAGCGAAGGATGAAGAATCTGAGCCTCCAGTGA 315 0.527 MASSSTWTAKQNKRFENALALYPEETPDRWQKLARAVGGKTVEEVKRHYEKLVEDVKLIEEGHVPLPDYNTNTEALRGGPSSTLRTYTTYLDHQERRMKNLSLQ 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3620g00028 104 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Pral3620g00028 104 FunFam Transcription factor SRM1 1 66 - -
Pral3620g00028 104 SMART sant 3 55 IPR001005 -
Pral3620g00028 104 Gene3D - 1 66 - -
Pral3620g00028 104 Pfam Myb-like DNA-binding domain 5 52 IPR001005 -
Pral3620g00028 104 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 75 IPR044636 GO:0003700
Pral3620g00028 104 ProSiteProfiles SANT domain profile. 2 57 IPR017884 -
Pral3620g00028 104 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Pral3620g00028 104 CDD SANT 6 53 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3620g00028 Pral-Chr3620 136020 136822 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral3620g00028 Myb_DNA-binding 4.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3620g00028 - - qsa:O6P43_016174 134.806