Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3619g00021 ATGCGAAGCTTCACACCTTTCCCGGACCTTTCTTTGAATATCAGCCCTCCAGATTGTAAAGCGAAACAAGTCGAGAGTCACACTAAGGGATTCGCAACCAAAAGGCCTCACAGTGATATGTGCTCCACCTCCGATTCTGGAAGCAGCGAGAGTGATTTAAGCCATGAAAATGCCTTTTCGCACCTTGGCTATCGTGAGCCTACTTTGAGCTTAGGCATCAAAATGGCAGATTTGAATCCCCTTCCACTCCCAAGAAACGTGAATCACTTTCACAACCCGCAACCTCACATCTATGGTCGCGACTTTAAACGAAACACCAGAGTCGTCTGCGGTGTGAAAAGGAGCATCAGAGCTCCTAGAATGCGATGGACTACAACCTTACATGCCCATTTTGTTCATGCTGTTCAACTTCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGTTAGAGTTGATGAATGTAAAAGATTTAACCCTAGCACACGTTAAGAGCCACCTACAGATGTATAGAACAGTGAAAAGCACTGCCAAATGCACAGGTCATGGCCACACTGATATGGGATTAGCCGTTGTCGATGAGCATGGAGCAGCCTCAGCTTGTGAGAGAACCCATCTACCTCTGCCACTTCAAAGATCTCACAACAACAAGGAATCATGGCAATCATCAACGGAGACAAGGACAAACGATAGTAGACAAAAACCAGGAACGAGTTTGACGTATTCTCAAGTGAAGGCAGACGAAAGCATGGTGGTTGGAAGGTCATTGTCAGATTCTTCAGATGAGACGCTTAACCTAGAATTCACCCTTGGAAGACCCAGTTGGAACACAGACCAGACTCAATCATCAACAGACTTAACTTTCTCAACTGTTAAACTTGCACTATATGTGCCCTTTCCCTGTCACCAACACTTTTGA 918 0.4575 MRSFTPFPDLSLNISPPDCKAKQVESHTKGFATKRPHSDMCSTSDSGSSESDLSHENAFSHLGYREPTLSLGIKMADLNPLPLPRNVNHFHNPQPHIYGRDFKRNTRVVCGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTAKCTGHGHTDMGLAVVDEHGAASACERTHLPLPLQRSHNNKESWQSSTETRTNDSRQKPGTSLTYSQVKADESMVVGRSLSDSSDETLNLEFTLGRPSWNTDQTQSSTDLTFSTVKLALYVPFPCHQHF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3619g00021 305 SUPERFAMILY Homeodomain-like 116 173 IPR009057 -
Pral3619g00021 305 Gene3D - 118 175 - -
Pral3619g00021 305 FunFam Myb family transcription factor 117 175 - -
Pral3619g00021 305 MobiDBLite consensus disorder prediction 209 242 - -
Pral3619g00021 305 MobiDBLite consensus disorder prediction 206 242 - -
Pral3619g00021 305 Pfam Myb-like DNA-binding domain 120 171 IPR001005 -
Pral3619g00021 305 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 279 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral3619g00021 305 NCBIfam myb-like DNA-binding domain, SHAQKYF class 119 172 IPR006447 GO:0003677
Pral3619g00021 305 MobiDBLite consensus disorder prediction 37 54 - -
Pral3619g00021 305 MobiDBLite consensus disorder prediction 15 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3619g00021 Pral-Chr3619 156395 158991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3619g00021 1 186 G2-like Transcription Factor Family AT5G42630 58.730 1.76e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral3619g00021 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3619g00021 - - dzi:111300998 287.345