Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3619g00011 | ATGGAACCAATCAATACATGCTCTTCTTCCGCTTCTTCTTCTGATGACTCTTCCACTTCCGGCTCTTCCTTCTCCAGCAACCCCCACAGGAATCACGACAATCCCGACAGAATCAAGGGCCCCTGGAGCGCCGAAGAAGACCGGATTCTGACCCGACTCGTTGAACGATATGGGCCCCGAAACTGGTCCTTGATCAGTCGCTACATTAAGGGAAGGTCCGGCAAGTCCTGCCGCCTGAGATGGTGTAACCAGTTGAGCCCCAGCGTGGAGCACCGTCCATTTTCCCAACAGGAGGACGACACCATCATAGCGGCTCATGCTCAGTACGGTAACAGGTGGGCCACCATCGCCCGGCTACTCCCGGGTCGGACCGATAATGCCGTGAAGAACCACTGGAACTCCACGCTCAAGAGAAGGGTGAAGGAGCAGCGTGCGGCGGAGGGCGGAGGTGCTAGTGTTGCCAACGACAGGGTTCTTGGTTCTCCCGGATCTGTCCAGCCCTGCATGGGATTAGAAATGGACAATGACCCGCTGACGGCGTTGACTCTGGCGCCGCCTGGAGCTAACGTGGCCGCGGCTGAACGCCAGCCAAGTCCGGGGAACGTGCCGGCGGGGTTCTGGGATGTGATGAGGGGTGTGATAGCGAGAGAAGTCAAAGAGTATGTTTCTTCCACGTTTTCTGAGAACCCAGGCTTCCATTAA | 702 | 0.5726 | MEPINTCSSSASSSDDSSTSGSSFSSNPHRNHDNPDRIKGPWSAEEDRILTRLVERYGPRNWSLISRYIKGRSGKSCRLRWCNQLSPSVEHRPFSQQEDDTIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVKEQRAAEGGGASVANDRVLGSPGSVQPCMGLEMDNDPLTALTLAPPGANVAAAERQPSPGNVPAGFWDVMRGVIAREVKEYVSSTFSENPGFH | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3619g00011 | 233 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 91 | 140 | IPR017930 | - | |
Pral3619g00011 | 233 | SMART | sant | 90 | 138 | IPR001005 | - | |
Pral3619g00011 | 233 | SMART | sant | 38 | 87 | IPR001005 | - | |
Pral3619g00011 | 233 | ProSiteProfiles | Myb-like domain profile. | 34 | 85 | IPR001005 | - | |
Pral3619g00011 | 233 | Gene3D | - | 38 | 90 | - | - | |
Pral3619g00011 | 233 | ProSiteProfiles | Myb-like domain profile. | 86 | 136 | IPR001005 | - | |
Pral3619g00011 | 233 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Pral3619g00011 | 233 | CDD | SANT | 41 | 83 | IPR001005 | - | |
Pral3619g00011 | 233 | Gene3D | - | 92 | 151 | - | - | |
Pral3619g00011 | 233 | PANTHER | MYB PROTEIN-RELATED | 39 | 172 | - | - | |
Pral3619g00011 | 233 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Pral3619g00011 | 233 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 34 | 89 | IPR017930 | - | |
Pral3619g00011 | 233 | SUPERFAMILY | Homeodomain-like | 36 | 132 | IPR009057 | - | |
Pral3619g00011 | 233 | CDD | SANT | 93 | 136 | IPR001005 | - | |
Pral3619g00011 | 233 | FunFam | MYB transcription factor | 39 | 90 | - | - | |
Pral3619g00011 | 233 | Pfam | Myb-like DNA-binding domain | 42 | 100 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3619g00011 | Pral-Chr3619 | 104376 | 105504 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3619g00011 | 26 | 167 | MYB Transcription Factor Family | AT4G37260 | 65.734 | 3.69e-59 | 187 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Pral3619g00011 | Myb_DNA-bind_6 | 2.5e-17 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3619g00011 | - | - | jre:109010305 | 316.62 |