Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3614g00005 ATGTGTTCATGGCGCTTCTGTTCCTGTTTTCTTCGTCTTCTTCGGAAAGATGATCAATATCATAGGTCTGGCTTACCTCTTTCCTCGACAAGCTTCTCATCAAGTTGCCAAGAGGTGGCATGTTGGATGCACACTGGAGAACGACAAACAGCGAAGATGAGAATGGCTTATTTAAGATCAATGTTGAATCAAGATATAAGTTTATTTGATACAGAGGCGTCAACCGGGGAGGTTATTTCTGCAATTTCCGGTGAGATCCTCGTTGTTCAAGATGCTCTGTCTGAGAAGGTAGGAAATTTCTTGCACTACATAAGCCGATTCGTGGTGGGATTTATCATTGGGTTTGTCAGAATATGGCAGATCAGTCTAGTCACACTTGCGATTGTTCCCTTGATTGCCATCGCCGGAGGCCTTTATGCTTATGTTACCGTCGGACTTATTGCCGAAGTCCGAAAAGCCTACGTTAGGGCTGGTGAAATCGCCGAAGAGGTGATAGGAAATGTCAGAATGGTTCAGGCGTTTGCGGGAGAAGAGAGAGCGGTGAGATCATACAAAGCGGCACTTGTGAACACTTATAAGAATGGCCGAAAAGCAGGTTTGGCAAAGGGTCTTGGACTAGGTTCCATGCACTGTGTCCTGTTTCTGTCATGGGCCCTGCTTATTTGGTTCACTAGTGTTATTGTTCACAAGAACATCGCCAACGGAGGCGAGTCTTTTACTACCATGCTCAATGTTGTCATCTCTGGACTGTCGCTTGGGCAGGCAGCACCAGATATATCTGCATTCATCCGAGCTAAGGCAGCGGCTTATCCCATTTTTGAGATGATAGAAAGGGAAACAGTAAGCAAAATCAGCTCAAAAACTGGTCGCAAATCAAGTAAATTGGATGGTCACATCCAACTTAAAGATGTCTGTTTCAGTTATCCATCTCGTCCTGATATAGTTATTTTCAACAAACTCTGTCTTGACATTCCACCTGCCAAAATTTTAGCTTTAGTAGGAGGAAGTGGGTCAGGAAAGAGCACTATTATATCACTGATTGAGCGCTTCTATGAACCCCTTTCTGGACAAATACTATTAGATGGGAATGATATTCGGGAACTCGATCTTAAATGGCTAAGAAGCCAAATTGGGCTGGTTAATCAAGAACCTGCCCTTTTTACCACTAGCATTAGAGAAAATATACTGTATGGAAAAAATGATGCTACTCTTGAAGAACTTCAACATGCCGTGAAGCTTTCAGATGCTGAGTCTTTCATTAACAATCTTCCTGAAAGGTTGGAAACTCAGGTTGGTGAGAGAGGGATACAACTTTCAGGTGGACAAAAACAAAGGATTGCAATATCTCGTGCCATTTTGAAGAACCCATCAATCCTTTTATTGGATGAAGCTACCAGTGCTCTGGATGCGGAATCTGAGAAGAGTGTACAAGAAGCTCTTGATCGCGTCATGGTTGGTAGAACAACTGTCATAGTGGCACACAGACTTTCTACAATTAGGAATGCAGATATGATTGCTGTTGTTCAGGGAGGGAGAATTGTAGAAATTGGTAACCATGAGGAGCTTATTTCTAACCCAAATGGCGCTTACGCATCTCTTGTTCAACTCCAGGAGAAAGCTTCTTCGCAAGGTCACCAGCCAGAGGGTTCTGCTCCCAATGTGGCAGCAAGGTACTCAAGAGAATTCTCGTGTACAACGAGCCTTAGCGGTAGTTTTCGGTCAGATGAAGAATCTTTAGGTCGCGTTTGTGCTGATGAAGTGGAAAGTGAAGACAAGTCAAGTCATGTTTCTGTAAAAAGGCTGTATTCAATGGTTGCACCTGACTGGTTTTATGGGGTTTTTGGCACCTTCGGTGCATTTATTGCTGGAGCTCAAATGCCACTTTTTGCTCTTGGAATCTCTCATGCTCTTGTGTCATACTATATGGACTGGGATACAACACGTCACGAGGTTAAAAAAATCACTTTCCTATTCTGTGGGGCAGCAATAGTGACTGTTATTGCCCATGCCATTGAGCATCTTTCTTTTGGAATCATGGGCGAGCGACTTACTCTTCGTGTACGAGAAATGATATTTTCTGCTATTTTGAAAAATGAAATTGGCTGGTTTGATGACACAAACAACACAAGTTCTATGCTATCATCTCGTTTAGAGGCAGATGCAACTTTATTCCGAACTATAGTTGTTGACCGGTCTACAATTCTCTTACAGAATGTTGGTCTGGTTGTTGCCTCGTTTATTATTGCCTTCATGTTGAACTGGAGATTAACACTAGTTGTCTTGGCCACATACCCTTTGATCATTAGTGGTCACATCAGCGAGAAACTTTTTATGAAAGGCTATGGTGGCAACTTGAGCACTGCATATCTGAAAGCCAACAGGCTGGCTGGGGAAGCTGTCAGTAACATGCGTACTGTTACTGCATTTTGTTCTGAAGAAAAGGTCCTAAAACTTTATGCTGATGAGCTCGTCCAGCCTTCTAAGCTTTCATTTAAACGGGGACAAATTGCTGGCATATTCTATGGCATTTCGCAGTTCTTCATTTTCTCTTCTTATGGCCTTGCCTTGTGGTATGGTTCAGTTTTGATGGAAAAGGAGCTGTCTAGCTTCAAATCCGTCATGAAGTCATTTATGGTTCTAATCGTAACTGCATTGGGCATGGGGGAGACATTGGCGTTGGCTCCGGACCTTTTGAAAGGGAACCAAATGGTCACCTCAGTTTTTGAAGTGATGGATAGAAAGTCAGGAATAGTGGCCGATGCCGGAGAAGAGCTTAAGATAGTTGAGGGAACAATCGAGCTAAAAAGCATCCATTTCAGTTACCCTTCAAGGCCTGATGTAGTAATTTTTGAAGATTTTAATCTGAAAGTGCCTTCAGGCAAGAGTATTGCCTTAGTGGGACAAAGCGGTTCTGGGAAAAGCTCTATCATCTCCCTTATACTCAGATTTTATGATCCATCGTCTGGGAGAGTGATGATTGATGGAAAAGACATCAGGAGACTCCATTTGAAGTCTTTAAGGAAGCATATTGGTCTGGTGCAACAAGAACCCGCTCTTTTTGCAACATCAATCTATGAAAACATTCTCTATGGAAAGGAAGGAGCTTCTGACTCAGAGGTAATTGAAGCAGCTAAGCTTGCCAATGCGCACAGTTTCATCAGTTCTCTTCCGGATGGTTACACTACCAAAGTTGGCGAACGAGGCGTACAACTCTCTGGTGGCCAGAGACAAAGGGTAGCCATAGCCAGAGCTATTCTAAAGAACCCAGAAATCTTGCTACTAGATGAAGCCACTAGTGCACTTGATGTGGAATCTGAGCGTGTGGTGCAACAAGCTCTGGACAGATTGATGCAGAACAGGACAACAATTATGGTGGCACACAGGCTATCCACAATAAGAAATGCAGATGAAATCTCAGTTTTGCAGAACGGGAAGATAATAGAGCAAGGGACTCATTCAAGTCTTATAGAGAACAAAAATGGAGCATATTTTAAATTAATCAATCTGCAACAATGCCAGTGA 3522 0.4299 MCSWRFCSCFLRLLRKDDQYHRSGLPLSSTSFSSSCQEVACWMHTGERQTAKMRMAYLRSMLNQDISLFDTEASTGEVISAISGEILVVQDALSEKVGNFLHYISRFVVGFIIGFVRIWQISLVTLAIVPLIAIAGGLYAYVTVGLIAEVRKAYVRAGEIAEEVIGNVRMVQAFAGEERAVRSYKAALVNTYKNGRKAGLAKGLGLGSMHCVLFLSWALLIWFTSVIVHKNIANGGESFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERETVSKISSKTGRKSSKLDGHIQLKDVCFSYPSRPDIVIFNKLCLDIPPAKILALVGGSGSGKSTIISLIERFYEPLSGQILLDGNDIRELDLKWLRSQIGLVNQEPALFTTSIRENILYGKNDATLEELQHAVKLSDAESFINNLPERLETQVGERGIQLSGGQKQRIAISRAILKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADMIAVVQGGRIVEIGNHEELISNPNGAYASLVQLQEKASSQGHQPEGSAPNVAARYSREFSCTTSLSGSFRSDEESLGRVCADEVESEDKSSHVSVKRLYSMVAPDWFYGVFGTFGAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKITFLFCGAAIVTVIAHAIEHLSFGIMGERLTLRVREMIFSAILKNEIGWFDDTNNTSSMLSSRLEADATLFRTIVVDRSTILLQNVGLVVASFIIAFMLNWRLTLVVLATYPLIISGHISEKLFMKGYGGNLSTAYLKANRLAGEAVSNMRTVTAFCSEEKVLKLYADELVQPSKLSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKELSSFKSVMKSFMVLIVTALGMGETLALAPDLLKGNQMVTSVFEVMDRKSGIVADAGEELKIVEGTIELKSIHFSYPSRPDVVIFEDFNLKVPSGKSIALVGQSGSGKSSIISLILRFYDPSSGRVMIDGKDIRRLHLKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHSFISSLPDGYTTKVGERGVQLSGGQRQRVAIARAILKNPEILLLDEATSALDVESERVVQQALDRLMQNRTTIMVAHRLSTIRNADEISVLQNGKIIEQGTHSSLIENKNGAYFKLINLQQCQ 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3614g00005 1173 PANTHER ABC TRANSPORTER B FAMILY 28 539 IPR039421 -
Pral3614g00005 1173 Pfam ABC transporter 951 1099 IPR003439 GO:0005524
Pral3614g00005 1173 Gene3D ABC transporter type 1, transmembrane domain 32 902 IPR036640 GO:0005524|GO:0016020
Pral3614g00005 1173 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 932 1168 IPR003439 GO:0005524
Pral3614g00005 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 925 1170 IPR027417 -
Pral3614g00005 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 293 537 IPR027417 -
Pral3614g00005 1173 FunFam ABC transporter B family member 19 289 538 - -
Pral3614g00005 1173 SUPERFAMILY ABC transporter transmembrane region 599 913 IPR036640 GO:0005524|GO:0016020
Pral3614g00005 1173 Gene3D - 923 1173 IPR027417 -
Pral3614g00005 1173 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 613 899 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3614g00005 1173 FunFam ABC transporter B family member 1 592 900 - -
Pral3614g00005 1173 CDD ABC_6TM_Pgp_ABCB1_D1_like 38 272 - -
Pral3614g00005 1173 FunFam ABC transporter B family member 4 922 1173 - -
Pral3614g00005 1173 ProSitePatterns ABC transporters family signature. 1071 1085 IPR017871 GO:0005524|GO:0016887
Pral3614g00005 1173 CDD ABC_6TM_Pgp_ABCB1_D2_like 602 917 - -
Pral3614g00005 1173 Gene3D - 297 550 IPR027417 -
Pral3614g00005 1173 SUPERFAMILY ABC transporter transmembrane region 39 278 IPR036640 GO:0005524|GO:0016020
Pral3614g00005 1173 CDD ABC_MTABC3_MDL1_MDL2 932 1170 - -
Pral3614g00005 1173 Coils Coil 1172 1173 - -
Pral3614g00005 1173 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 299 535 IPR003439 GO:0005524
Pral3614g00005 1173 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 264 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3614g00005 1173 ProSitePatterns ABC transporters family signature. 438 452 IPR017871 GO:0005524|GO:0016887
Pral3614g00005 1173 Pfam ABC transporter transmembrane region 39 247 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3614g00005 1173 Pfam ABC transporter transmembrane region 614 885 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral3614g00005 1173 Pfam ABC transporter 318 466 IPR003439 GO:0005524
Pral3614g00005 1173 CDD ABC_MTABC3_MDL1_MDL2 299 537 - -
Pral3614g00005 1173 FunFam ABC transporter B family member 1 19 298 - -
Pral3614g00005 1173 SMART AAA_5 326 518 IPR003593 GO:0016887
Pral3614g00005 1173 SMART AAA_5 959 1145 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3614g00005 Pral-Chr3614 41332 49955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3614g00005 13 543 Calmodulin-binding Proteins AT2G36910 40.410 2.46e-110 373