Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3612g00076 ATGCCTATTGCTAATCGCATTTATCACTGGCAATTCAGTCAGAGATCAGAATTGTCTGGCAGGATAATAAGGGTAGAGCTTGCAAAGAGATTCAAGAAACCTCCTCCTCCACGGCCTCCTAAAAGTCCCCCTGCCGGCGAAACAAGCCATAAAATTTATGCGTCGAATCTTGCCTGGAAAGCAAGATCTAGCCATCTCAGAGCATTCTTTGCAGAGAATTTCAAGTCACCGGTTTCAGCCAGGGTTGTCTTTGACAGCCCTAATGGAAGATCTGCTGGGTATGGATTTGTTTCTTTTTCTACAAGAGATGAAGCAGAGGCTGCCATTTCTACTCTAGATGGGAAGGAATTAATGGGGCGACCACTTCGCCTAAAATTCAGTGAAAGGACTGTCAAAGAATCTGGGGATGAGAAAGGGGAGGACCAAGGTTCTGATGATCAAGCGGCAGAACCAGAGAAAGTAGAAGAGCAAGGTTCTGATGGTGAACCGGCAGAATCATAG 501 0.4591 MPIANRIYHWQFSQRSELSGRIIRVELAKRFKKPPPPRPPKSPPAGETSHKIYASNLAWKARSSHLRAFFAENFKSPVSARVVFDSPNGRSAGYGFVSFSTRDEAEAAISTLDGKELMGRPLRLKFSERTVKESGDEKGEDQGSDDQAAEPEKVEEQGSDGEPAES 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3612g00076 166 SMART rrm1_1 51 125 IPR000504 GO:0003723
Pral3612g00076 166 SUPERFAMILY RNA-binding domain, RBD 33 131 IPR035979 GO:0003676
Pral3612g00076 166 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 50 129 IPR000504 GO:0003723
Pral3612g00076 166 PANTHER OS02G0815200 PROTEIN 15 128 - -
Pral3612g00076 166 Gene3D - 31 147 IPR012677 -
Pral3612g00076 166 MobiDBLite consensus disorder prediction 30 49 - -
Pral3612g00076 166 MobiDBLite consensus disorder prediction 126 160 - -
Pral3612g00076 166 MobiDBLite consensus disorder prediction 126 166 - -
Pral3612g00076 166 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 52 123 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3612g00076 Pral-Chr3612 494869 496792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3612g00076 46 135 Eukaryotic Initiation Factors Gene Family AT1G49760 33.696 8.17e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3612g00076 - - gmx:100793319 199.134