Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3612g00075 ATGGCCACTCTGGAATCTGGACTCACAGTCTTGGGATCTTTCCGCTGTTCTAATAAGTACTCTTTATCCGCCAAATCATTCGATTCGATAAAGCTCAAAGTCTCCACTTCTCTTTATCCCATTTCCCACAGTTGCGTCGTCCCCTCGATTTTATCTTCTATCGACTCCAGCAGGAGGCTCTGCTTCGAATTATGCTCTGCGCTGCAAGAGGCGGTAACAGAAGAAAAACCAGGGCAAACCCAGGAAAACAACATAAAAAAGAAGCTCTACGTGTTTAATCTACCATGGTCGCTATCGGTGGTGGACATCAAGAACCTCTTTGGTCAATGCGGAACTGTAACCGATGTCGAGATAATAAAAAACAAAGATGGCAAGAGCAGAGGATTTGCCTTCGTCACTATGGCTTCCGGGGAAGAGTCGCAGACTGCAATTGATAAACTTGACTCTCATTCTCAGACTAGCGTTTGCAGAATCGGGTCTTCGGGAACTGGGGTCTAG 498 0.4618 MATLESGLTVLGSFRCSNKYSLSAKSFDSIKLKVSTSLYPISHSCVVPSILSSIDSSRRLCFELCSALQEAVTEEKPGQTQENNIKKKLYVFNLPWSLSVVDIKNLFGQCGTVTDVEIIKNKDGKSRGFAFVTMASGEESQTAIDKLDSHSQTSVCRIGSSGTGV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3612g00075 165 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 165 IPR000504 GO:0003723
Pral3612g00075 165 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 149 IPR000504 GO:0003723
Pral3612g00075 165 Gene3D - 53 155 IPR012677 -
Pral3612g00075 165 PANTHER OS02G0815200 PROTEIN 65 150 - -
Pral3612g00075 165 SMART rrm1_1 88 159 IPR000504 GO:0003723
Pral3612g00075 165 SUPERFAMILY RNA-binding domain, RBD 74 150 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3612g00075 Pral-Chr3612 493911 494740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3612g00075 78 148 Eukaryotic Initiation Factors Gene Family AT1G34140 36.620 1.34e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3612g00075 - - qsa:O6P43_025150 170.629