Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3612g00047 ATGGAGGTAGCTAAGGACCTTACTGCTGGCACAGTTGGAGGTGTAGCGCAATTAGTATGTGGACACCCTTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCACTTGCTGGCCAGCCTCCCAAGTATTCAGGTGCTATTGATGCTGTCAAGAAGACATTAGCTGCTGAAGGTCCCAGAGGGTTATACAAAGGGATGGGTGCACCACTTGCCACAGTAGCAGCATTTAACGCTGTCCTGTTCTCGGCCAGGGGACAAATGGAGGCCTTATTGAGGTCCCATCCTGGTGCGGCACTTACCGTGAAACAGCAGGTTGTCTGTGGCGCTGGTGCTGGAGTTGTAGTTTCCATTCTAGCTTGCCCCACTGAACTTATCAAATGCAGGTTGCAAGCACAAAGTGTTGTTGCAGGTTCTGGAACAGCTGCTGTGGCTATCCAGTATGGAGGACCCATGGATGTGGCCAGGCAAGTTTTAAGATCTGAAGGGGGAGTGAGAGGTCTATTCAAGGGCATGGTTCCAACAATGGCACGTGAGGTACCGGGAAACGCCGTCATGTTCGGTGTATATGAAGCGATAAAGCAGTTTCTAGCGGGAGGTTCTGATACATCAGGGCTAAGTAGGGGCTCCTTGCTTGTTTCTGGAGGCTTGGCTGGAGCTTCAGTGTGGTTGGTGGTCTACCCAACTGATGTGGTTAAGAGTGTGATTCAAGTGGATGATTACAGAAAGCCAAAATTTTGCGGTACCATTGATGCCTTCAGGAAGATTTTAGCTTCAGAAGGGTTAAAAGGTCTGTACAAGGGCTTTGGTCCTGCAATAGCTAGAAGTGTCCCAGCAAATGCAGCTTGCTTCTTGGCTTATGAGATGACTAGATCAGCCCTGGCTTGA 891 0.4983 MEVAKDLTAGTVGGVAQLVCGHPFDTIKVKLQSQPTPLAGQPPKYSGAIDAVKKTLAAEGPRGLYKGMGAPLATVAAFNAVLFSARGQMEALLRSHPGAALTVKQQVVCGAGAGVVVSILACPTELIKCRLQAQSVVAGSGTAAVAIQYGGPMDVARQVLRSEGGVRGLFKGMVPTMAREVPGNAVMFGVYEAIKQFLAGGSDTSGLSRGSLLVSGGLAGASVWLVVYPTDVVKSVIQVDDYRKPKFCGTIDAFRKILASEGLKGLYKGFGPAIARSVPANAACFLAYEMTRSALA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3612g00047 296 PRINTS Mitochondrial carrier protein signature 172 192 IPR002067 GO:0055085
Pral3612g00047 296 PRINTS Mitochondrial carrier protein signature 222 240 IPR002067 GO:0055085
Pral3612g00047 296 PRINTS Mitochondrial carrier protein signature 119 133 IPR002067 GO:0055085
Pral3612g00047 296 PRINTS Mitochondrial carrier protein signature 267 285 IPR002067 GO:0055085
Pral3612g00047 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 294 IPR018108 -
Pral3612g00047 296 Pfam Mitochondrial carrier protein 102 199 IPR018108 -
Pral3612g00047 296 Pfam Mitochondrial carrier protein 213 295 IPR018108 -
Pral3612g00047 296 Pfam Mitochondrial carrier protein 2 94 IPR018108 -
Pral3612g00047 296 Gene3D Mitochondrial carrier domain 1 296 IPR023395 -
Pral3612g00047 296 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 3 295 - -
Pral3612g00047 296 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 1 295 - -
Pral3612g00047 296 SUPERFAMILY Mitochondrial carrier 3 289 IPR023395 -
Pral3612g00047 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 101 197 IPR018108 -
Pral3612g00047 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 92 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3612g00047 Pral-Chr3612 334161 338222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3612g00047 21 290 Antiporters AT1G79900 34.657 4.10e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3612g00047 K15109 - gmx:100787332 477.248