Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3612g00020 ATGGAGGAATTGGATAACCAGGGTTTAAGGCTTGTTGTGGTTTATATCCTTTGCCTTCTTCTGTTTATCAGATCAGCTTTTGCAAGTGAAGGTTTTGTGAGCATAGCGTGCTGTGCTGATTCAGATTATACAGATCCAAAGACTTCAGTAAATTACACGTCAGATTTTAGTTTCTACCCAGATAAAACAAACTGCGTAGACACAATTAAGCCCGTGGAGAACCATGGGAAAGCTAGAGTGTTTGATATAGATAAAGGAAAAAGATGTTACAACTTGCCAACAATTAAGGATCAAGCATATCTGCTCAGGGGCGCATTTCCATCTGATGACTCTCTGAGTGTATCTCCGAATTCCTCTTTTGTTGTTACGATTGGGGTTACCTTATTAGGTGTGGTAAATAAACCATCTCAGGACGTGGAATTACTTGAAGGAATTTTCAGAGCTACAAAGAATTACACGAGTTTCTGCTTAGTTGCGGAAGCCGGAAGTCCTTATGTTTCACTTATTGAAGTGAGGCCGTTTGGAGAAGAGTACCTACTGGATTCCCCTTCAAGTGTCCTAAAAGTGATCACAAGAAATAACTTAGGGGCCACCGGAGATGACATCAGGTACCCGCTTGACCGAAGTGACAGAATCTGGAAAGCTACTTCAAGTCCGTCATCTTCTCACGTATCATCGAATGCAAACATTTCCAGCCACAATGCTAATTCGACACCTCCTCTACGAGTCTTACGAACCGCTCTTACGCATGCTGATAGGTTGGAATTCTTCCACAGTGGCCTCGACCCTGAGAATTCCGAATACCGTGTGATTCTCAGCTTTCTTGAATTGAATAATAGCGTCGGACGAAGCAAAAGGGTGTTTGATATTTACGTGAACGGGGTGATCAAAGTGCCGAAGTTTGACATATTTGCTGGTGGATCGAATTACAGACAAGCTGTTTTGAACTTGTCGGCAAATGGGTCGCTGAATCTTACCTTGAGCAAGGCTTCTGGGTCTGAGAATGGACCGCTTTGTAATGCATACGAGATCCTGAAGGTCATCCCCTGGAAACAGGAGACCAACCAAACAGACTCGGAAGTGATGTTGAAGGTGAGAGAGCAATTGTTAGAGAATAACGGAGGAAATAAAGAGCTGGAGAGTTGGAATGGAGACCCTTGCATTATGTTTCCATGGAAGCATGTAGGATGTGATCGTTTAAGTGGTCAACTTGTTATCACTAAACTGGATCTTTCTTCAAGTAATCTCCGAGGACCAATTCCTTCCAGTATCACTGGGTTGTCCAACTTAAAAATACTGAACCTGAGCTACAATAGCTTAAGTGGGAATATCCCCACATTTCTGCCTTCATCTTTGCTTACATCAATAGATCTGAGCCACAATGATCTCACAGGATCGCTTCCATGGACCCTTCCCTTACTGCCACAACTGAAGTCCTTGTATTTTGGCTGCAATAAGCGCATGGACAAGGAGATTCCAACTTCCTTAAACAGCTTAGAAAATACAGATTACGGAAGTTGCAAACCTGGAGACACAGGAATTTCACAAAAGCATATCATCATTGGCACTGTTACATGTGGATTGCTCCTGTTCATTTTGGCCGTTGGAATTCTTTTTGGTTGCCATAGAAGAGGAAAATTAGTCCCCTGGAAAGCATCTGATGAAAAGGGATACCCACCAACCACAAATTTAATCTTCTCTTTAACCAGTAAAGATGATTTCTTCGTCAAGTCAGTGTCCATTCAAACATTCACGCTTGAATACATAGAGGCAGCCACCCAAAACTACAAAACTTTGATTGGTGAAGGAGGGTTTGGGTCTGTTTACCGTGGCACCCTAGAAGATGGCCAACAAGTGGCAGTGAAGGTCCGTTCAGCCACATCAACTCAGGGGACTCGTGAATTTGACAACGAGGTAAACTTGCTCTCTGCTATACGCCATGAGAACCTGGTGCATCTTATTGGTTACTGTTGTGAAAAGGATCAACAAATTCTCGTGTATCCTTTTATGTCCAATGGTTCTTTACAAGATAGGCTTTATGCAGGGGAACCAGCAAAGAGAAAACCATTAGACTGGCCAACCAGGTTATCTATTGCTCTGGGTGCAGCTCGAGGTTTGTCGTATCTCCATACATTTTCGGGACGTTCTGTTATACACAGAGACGTCAAATCAAGCAACATACTTCTGGATCACAGCATGTGTGCCAAGGTAGCAGACTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGATAGTGGTGCTTCTCTTGAAGTAAGAGGAACCGCAGGATATATGGACCCTGAGTACTACACAACACAGCAATTATCGGCAAAGAGTGATGTCTTTAGCTTCGGCATGGTTCTACTTGAAATTGTGAGCGGCCGGGAACCTCTCAACACACGAAGACCACGAGATGAGTGGAACTTGGTAGAATGGGCTAAACCATACATAAGGGCGTCAAAGATCGATGAAATTGTGGATCCTAACATCAAGGGAGGATATCATGCAGAGGCCATGTGGAGAGTTGTGGAAACAGCACTGTCATGTATTGAACCATTCTCAGTGCATCGACCAAGCATGGCTGATATTGTACGTGAGTTGGAGGATGCTCTGATTATAGAAAACAATGCATCAGAATACATGAAGTCCATAGAAAGCCTTGGAGGATCAAATCGCTATTCCTTTGTAATAGAGAAGAAGATTGTAACCCCATCTCCATCCACAACAGAATCAACCGTCTCGCCTAAAACCATGTCCCACCCACATCCCAGATAG 2775 0.4346 MEELDNQGLRLVVVYILCLLLFIRSAFASEGFVSIACCADSDYTDPKTSVNYTSDFSFYPDKTNCVDTIKPVENHGKARVFDIDKGKRCYNLPTIKDQAYLLRGAFPSDDSLSVSPNSSFVVTIGVTLLGVVNKPSQDVELLEGIFRATKNYTSFCLVAEAGSPYVSLIEVRPFGEEYLLDSPSSVLKVITRNNLGATGDDIRYPLDRSDRIWKATSSPSSSHVSSNANISSHNANSTPPLRVLRTALTHADRLEFFHSGLDPENSEYRVILSFLELNNSVGRSKRVFDIYVNGVIKVPKFDIFAGGSNYRQAVLNLSANGSLNLTLSKASGSENGPLCNAYEILKVIPWKQETNQTDSEVMLKVREQLLENNGGNKELESWNGDPCIMFPWKHVGCDRLSGQLVITKLDLSSSNLRGPIPSSITGLSNLKILNLSYNSLSGNIPTFLPSSLLTSIDLSHNDLTGSLPWTLPLLPQLKSLYFGCNKRMDKEIPTSLNSLENTDYGSCKPGDTGISQKHIIIGTVTCGLLLFILAVGILFGCHRRGKLVPWKASDEKGYPPTTNLIFSLTSKDDFFVKSVSIQTFTLEYIEAATQNYKTLIGEGGFGSVYRGTLEDGQQVAVKVRSATSTQGTREFDNEVNLLSAIRHENLVHLIGYCCEKDQQILVYPFMSNGSLQDRLYAGEPAKRKPLDWPTRLSIALGAARGLSYLHTFSGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGMVLLEIVSGREPLNTRRPRDEWNLVEWAKPYIRASKIDEIVDPNIKGGYHAEAMWRVVETALSCIEPFSVHRPSMADIVRELEDALIIENNASEYMKSIESLGGSNRYSFVIEKKIVTPSPSTTESTVSPKTMSHPHPR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3612g00020 924 Pfam Malectin-like domain 40 347 IPR024788 -
Pral3612g00020 924 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 670 880 - -
Pral3612g00020 924 Gene3D Transferase(Phosphotransferase) domain 1 670 887 - -
Pral3612g00020 924 SMART serkin_6 596 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3612g00020 924 Gene3D - 188 347 - -
Pral3612g00020 924 MobiDBLite consensus disorder prediction 904 918 - -
Pral3612g00020 924 CDD STKc_IRAK 600 868 - -
Pral3612g00020 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 717 729 IPR008271 GO:0004672|GO:0006468
Pral3612g00020 924 SUPERFAMILY L domain-like 379 500 - -
Pral3612g00020 924 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Pral3612g00020 924 FunFam Nodulation receptor kinase 559 669 - -
Pral3612g00020 924 ProSiteProfiles Protein kinase domain profile. 594 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3612g00020 924 Gene3D Phosphorylase Kinase; domain 1 566 669 - -
Pral3612g00020 924 Gene3D Ribonuclease Inhibitor 354 508 IPR032675 -
Pral3612g00020 924 MobiDBLite consensus disorder prediction 904 924 - -
Pral3612g00020 924 Pfam Leucine rich repeat 407 463 IPR001611 GO:0005515
Pral3612g00020 924 FunFam Leucine-rich repeat receptor-like kinase 358 470 - -
Pral3612g00020 924 SUPERFAMILY Protein kinase-like (PK-like) 574 867 IPR011009 -
Pral3612g00020 924 MobiDBLite consensus disorder prediction 216 237 - -
Pral3612g00020 924 PANTHER OS07G0107800 PROTEIN-RELATED 33 871 - -
Pral3612g00020 924 Pfam Protein tyrosine and serine/threonine kinase 597 867 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3612g00020 Pral-Chr3612 127422 134845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3612g00020 8 874 Receptor kinase-like Gene Family AT1G67720 34.323 1.72e-135 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pral3612g00020 Malectin_like 9.8e-45 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3612g00020 - - gmx:100781986 1206.43