Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3612g00019 ATGGCTCGGCGTCAACCCAATATTCCTCGACGTGATCATCAAGAAACTGTGATAGAGATTAAGAGGCCCGTGAACTTCACAGGAGGGCTTGAGTTTTCTGGTCTGACCTACACAGTAACGAAGAAGAAGAAGGTTGATAACAGTTGGGTGAAGGAGAACGTGGACTTGCTTCATAACATAACTGGCTACGCACCAAAGGGTTGTGTCACTGCGGTGATGGGTCCCAGTGGTGCAGGGAAGTCTACGTTCTTGGATGGTGTTGCTGGAAGGATTGCAAGTGGGAGCCTTAGGGGAAGGGTGTGTTTGGATGGCACAGATACTAACCCTACTTTGATCAAAAGAACTTCTGCTTATATCATGCAGGACGATAGGCTCTTCCCAATGCTCACTGTCTATGAAACTTTCATGTTTGCTGCTGATTTTCGACTCGGCCCTCTTCCTCTCGCTGAAAAGAAGCACAGAGTCGAGAAGCTCATTGAACAGCTTGGCTTATCATCAACTCGAAACACGTACATCGGAGACGAAGGAACAAGAGGAGTATCCGGGGGAGAGAGACGTCGTGTATCGATCGGCGTCGACATCATCCACGGACCATCCCTTCTATTTCTGGACGAACCCACTTCGGGTTTGGACTCCACCAGTGCCCACAGCGTCATCGAAAAAGTCCACGACATCGCCCGCGGTGGCAGCACCGTCATCCTCACCATCCACCAGCCTTCCTCCAGAATCCAGCTTCTTCTCGACCACCTCATCATCCTCGCCAGAGGCCAGCTCATGTTTCAGGGCTCTCCCAAAGCCGTCTCTCTTCATCTGGGTCGCATGGGGCGTAAAGTCCCCAAGGGAGAGAATCCAATCGAGCATCTCATTGATGTGATTCAAGAATATGATCAGTGTGATGTTGGTGTCGGAGCTCTCGCTGAGTTTGCCCGCACCGGAGTGAAACCCCCTCCTTTGTCTGACCAGGAATTTTCTCTCTCCACCGTCGCACCGTCCACCCCAGGTCGAAACCCTCGACTTGCGGATCGTTCCGCCGTCGACGATTTTGACCACAGTGTGAGAAGTGCCAGAAGCCCTCATACACCCCGGTCCTGGAATGCCGGCAATAGTGGATTGTTCCAGAAGTTAACACCTTCCCGCTTTAAGAATGAACACAGACTGCAGAATAATCGTTTAAGTAGTAATGCTTCGCCAGGGTATTACACGTACTCGAGCGAGATCCTCGCGGCGACACCGACGCCTCATAGCAGCGACTACACTGTGAATGAGAATGACTACATGACTCCCCCAGATGGCGTTCCAAAGCATCTGGGTCCGAAATTTGCGAACTCCTTCTTGGCGGAGACGTGGATTCTGATGCAGCGGAACTTCATAAACATCCGGCGAACCCCTGAGCTTTTTCTGTCCAGATTGATGGTGCTCACGGTCATGGGCATCATGATGGCCTCCATGTTCAAGAACCCTAAAGAAAACGTACAAGGGATCACCAACCGCATCAGTTTCTTCATCTTCACCGTCTGTCTCTTCTTCTTCTCTTCCAACGACGCCGTGCCGGCGTTCATCCAAGAACGATTTATTTTCATAAGGGAGACTTCCCACAACGCCTACCGAGCCTCGTCCTACACCATCGCCGGAATAATTACTCACACCCCTTTTCTTGTTCTGCAAGCTTCCGTTTATGCCATCATCGTCTGGTTTGCTTTGAAGCTCCAAGGCCCTTTTCTATACTTCGTGTTGGTTCTCTTCGTTTCCCTTCTCTCCACCAACTCGTTCGTCGTTTTTGTGAGCTCAGTGGTTCCAAACTATATCCTGGGTTATGCTGCTGTTATCGCTTTCACTGCTTTGTTCTTCTTGTTCTGTGGTTACTTCTTGAGCAGCAAGGACATTCCGATTTATTGGCGTTGGATGAACAAAATTTCGACCATGACGTATCCCTATGAGGGGCTTTTGATCAACCAGTATCGGAACTCAGATAGGTTTGGATCAAACCTGGACGGGACAAATATTACAGGTCTTGATATCTTGAACAATCTCCACATAAGTACCGATTCGTTTAGGAAGTGGGAAAATGTGATCATAATGTTGTTCTGGGCCGTCCTATATAGGATTTTGTTTTACTTGGTCCTTCGTTTTGCTTCGAAAAACCAGAGGTCGTAG 2154 0.4935 MARRQPNIPRRDHQETVIEIKRPVNFTGGLEFSGLTYTVTKKKKVDNSWVKENVDLLHNITGYAPKGCVTAVMGPSGAGKSTFLDGVAGRIASGSLRGRVCLDGTDTNPTLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLPLAEKKHRVEKLIEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARGGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPKAVSLHLGRMGRKVPKGENPIEHLIDVIQEYDQCDVGVGALAEFARTGVKPPPLSDQEFSLSTVAPSTPGRNPRLADRSAVDDFDHSVRSARSPHTPRSWNAGNSGLFQKLTPSRFKNEHRLQNNRLSSNASPGYYTYSSEILAATPTPHSSDYTVNENDYMTPPDGVPKHLGPKFANSFLAETWILMQRNFINIRRTPELFLSRLMVLTVMGIMMASMFKNPKENVQGITNRISFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGIITHTPFLVLQASVYAIIVWFALKLQGPFLYFVLVLFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSKDIPIYWRWMNKISTMTYPYEGLLINQYRNSDRFGSNLDGTNITGLDILNNLHISTDSFRKWENVIIMLFWAVLYRILFYLVLRFASKNQRS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3612g00019 717 CDD ABCG_EPDR 30 262 - -
Pral3612g00019 717 Gene3D - 30 273 IPR027417 -
Pral3612g00019 717 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 268 IPR027417 -
Pral3612g00019 717 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 280 IPR003439 GO:0005524
Pral3612g00019 717 Pfam ABC-2 type transporter 448 653 IPR013525 GO:0016020|GO:0140359
Pral3612g00019 717 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 705 - -
Pral3612g00019 717 Pfam ABC transporter 57 208 IPR003439 GO:0005524
Pral3612g00019 717 FunFam ABC transporter G family member 6 40 278 - -
Pral3612g00019 717 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524|GO:0016887
Pral3612g00019 717 MobiDBLite consensus disorder prediction 340 356 - -
Pral3612g00019 717 MobiDBLite consensus disorder prediction 316 369 - -
Pral3612g00019 717 SMART AAA_5 66 264 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3612g00019 Pral-Chr3612 121087 123809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3612g00019 12 359 Calmodulin-binding Proteins AT2G36910 25.915 1.39e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3612g00019 K05681 - gmx:100804809 1047.73