Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3610g00027 ATGTCAGCTCCGGCGACGACGAAAGACGAGAGCCAGGACTCAGGCGGCCGGAAAAGCACCTCTGCGACGGCGGCGAGGCAGTTAGAGCAAGGGCTAAAGTGCCCGAGATGTGACTCTCCCAACACTAAATTCTGCTACTACAATAATTACAGCCTGACTCAGCCGAGGCATTTCTGCAAGACTTGTCGTAGATACTGGACAAAAGGCGGAGCCTTGCGTAACGTTCCGATTGGCGGCGGTTGCCGGAAGAACAAGAAACTGAAATCATCGCCATCCTCAAGACTCTCAAATGACGGTGGCTTCTCCCCTTCTCTGGACTTTCACCTTGGTGGTACCGCCGCTAACTTCTTACCCTTCCCTAGGCTGAACGATCACCCTCCAGCTCTTAACCTCGAAGGAACCTCAAGTTCTTTCAATATTGGATATAATTACCCACTTAACGGTGGTGTAATCCAAGGTATGAGCTCACTGAACGTTCAGAGCAGCCTTGCTTCTTCGATTGAGTCTCTGAGCTCAATAAACCAAGACCTTCACTGGAAACTGCAGCAGCAGAGACTAGCGATGCTGTTTGGAGGGGATAATACTGCAAGTAGTCTAAAAGATAACCGACCCGTTTCAGCGATTAATCTCGAGAACCAGAGTCATCAGAGATCATCAAACCCTATTTTGTTTCAGAATCTTGAGATTTCGAAGCCTGAAGAGATCTCTCCCGTGGTCGGAAGTTCGAGAAGAGATACACCCACAGAGTGGTTCTTCGGGAGCTCGTATGCTTCAGTGACTCCAACACCAACTACAAGCAGCGGAGGTGGAGGTAATGGGAATGATAATGGAAGCAATAACTGGAGTCTTCAAGGTTGGGGTGATGTGCAGCAGCAATACAGTGCTTTGCCCTAG 894 0.4944 MSAPATTKDESQDSGGRKSTSATAARQLEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKLKSSPSSRLSNDGGFSPSLDFHLGGTAANFLPFPRLNDHPPALNLEGTSSSFNIGYNYPLNGGVIQGMSSLNVQSSLASSIESLSSINQDLHWKLQQQRLAMLFGGDNTASSLKDNRPVSAINLENQSHQRSSNPILFQNLEISKPEEISPVVGSSRRDTPTEWFFGSSYASVTPTPTTSSGGGGNGNDNGSNNWSLQGWGDVQQQYSALP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3610g00027 297 ProSitePatterns Zinc finger Dof-type signature. 34 70 IPR003851 GO:0003677|GO:0006355
Pral3610g00027 297 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 202 IPR045174 GO:0003700|GO:0006355
Pral3610g00027 297 Pfam Dof domain, zinc finger 30 86 IPR003851 GO:0003677|GO:0006355
Pral3610g00027 297 ProSiteProfiles Zinc finger Dof-type profile. 32 86 IPR003851 GO:0003677|GO:0006355
Pral3610g00027 297 MobiDBLite consensus disorder prediction 253 297 - -
Pral3610g00027 297 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3610g00027 Pral-Chr3610 211594 212716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3610g00027 18 297 C2C2-Dof Transcription Factor Family AT5G65590 40.190 4.26e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral3610g00027 zf-Dof 7.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3610g00027 - - pcin:129284602 485.337