Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3610g00027 | ATGTCAGCTCCGGCGACGACGAAAGACGAGAGCCAGGACTCAGGCGGCCGGAAAAGCACCTCTGCGACGGCGGCGAGGCAGTTAGAGCAAGGGCTAAAGTGCCCGAGATGTGACTCTCCCAACACTAAATTCTGCTACTACAATAATTACAGCCTGACTCAGCCGAGGCATTTCTGCAAGACTTGTCGTAGATACTGGACAAAAGGCGGAGCCTTGCGTAACGTTCCGATTGGCGGCGGTTGCCGGAAGAACAAGAAACTGAAATCATCGCCATCCTCAAGACTCTCAAATGACGGTGGCTTCTCCCCTTCTCTGGACTTTCACCTTGGTGGTACCGCCGCTAACTTCTTACCCTTCCCTAGGCTGAACGATCACCCTCCAGCTCTTAACCTCGAAGGAACCTCAAGTTCTTTCAATATTGGATATAATTACCCACTTAACGGTGGTGTAATCCAAGGTATGAGCTCACTGAACGTTCAGAGCAGCCTTGCTTCTTCGATTGAGTCTCTGAGCTCAATAAACCAAGACCTTCACTGGAAACTGCAGCAGCAGAGACTAGCGATGCTGTTTGGAGGGGATAATACTGCAAGTAGTCTAAAAGATAACCGACCCGTTTCAGCGATTAATCTCGAGAACCAGAGTCATCAGAGATCATCAAACCCTATTTTGTTTCAGAATCTTGAGATTTCGAAGCCTGAAGAGATCTCTCCCGTGGTCGGAAGTTCGAGAAGAGATACACCCACAGAGTGGTTCTTCGGGAGCTCGTATGCTTCAGTGACTCCAACACCAACTACAAGCAGCGGAGGTGGAGGTAATGGGAATGATAATGGAAGCAATAACTGGAGTCTTCAAGGTTGGGGTGATGTGCAGCAGCAATACAGTGCTTTGCCCTAG | 894 | 0.4944 | MSAPATTKDESQDSGGRKSTSATAARQLEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKLKSSPSSRLSNDGGFSPSLDFHLGGTAANFLPFPRLNDHPPALNLEGTSSSFNIGYNYPLNGGVIQGMSSLNVQSSLASSIESLSSINQDLHWKLQQQRLAMLFGGDNTASSLKDNRPVSAINLENQSHQRSSNPILFQNLEISKPEEISPVVGSSRRDTPTEWFFGSSYASVTPTPTTSSGGGGNGNDNGSNNWSLQGWGDVQQQYSALP | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3610g00027 | 297 | ProSitePatterns | Zinc finger Dof-type signature. | 34 | 70 | IPR003851 | GO:0003677|GO:0006355 | |
Pral3610g00027 | 297 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 19 | 202 | IPR045174 | GO:0003700|GO:0006355 | |
Pral3610g00027 | 297 | Pfam | Dof domain, zinc finger | 30 | 86 | IPR003851 | GO:0003677|GO:0006355 | |
Pral3610g00027 | 297 | ProSiteProfiles | Zinc finger Dof-type profile. | 32 | 86 | IPR003851 | GO:0003677|GO:0006355 | |
Pral3610g00027 | 297 | MobiDBLite | consensus disorder prediction | 253 | 297 | - | - | |
Pral3610g00027 | 297 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3610g00027 | Pral-Chr3610 | 211594 | 212716 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3610g00027 | 18 | 297 | C2C2-Dof Transcription Factor Family | AT5G65590 | 40.190 | 4.26e-59 | 189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Pral3610g00027 | zf-Dof | 7.8e-33 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3610g00027 | - | - | pcin:129284602 | 485.337 |