Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3610g00013 ATGGACTCATTAGAGAAGCAGAGAGAGTTTGCCGGCGACGATCAGGAGTCGCCGAGAGGTATACTGGAAATCCCTGTTTCAGGCACAGAATCTGATCACAGCGGAAGCAGCAGCATCTACAGCTCAAGCTCGCCGGAGAAGTCGTCGGAGGCGGAGAGAGTGAACGTGAGGGAAGGGTTGGGACAGCCATGGAAGGCGATGATGGAGTCGTTCAAGAAGAAGTCAGCGCAGAGAATATCGGCCATTTCATTACTTACAGCAAGCTACGAGATGTCAAGGAAAAGCTTGAGGAAGAGGAGAATGGAACGGATTCGAAGCGCAGAAGAGGGAATCAATCTGGGAGCCATACCCACAAAGCCTTCATGGAGGAACTTCGATTACGCAGAGCTACAAGCAGCAACCGACGATTTCAATCCAGGTTCTGAATGCTTGGAGTGGAAGACAAGGTTCAAGGTAGCTATTGGTGTGGCACAGGGCTTGCAATACCTGCATCATGATTGCCAAAGAAGAATTATTCACAGAGACATCAAGGCCTCCAACATATTACTAAACGAAAATTACGAAGCTGAGATTTCAGATTTTGGACTCGCGAAATGGCTGCCAGAGAAGTGGACTCACCATGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTTATGCATGGAATTGTGGATGAAAAGACTGATGTGTTCGCCTTTGGGGTTTTGCTGCTGGAACTCATTACAGGTCGTCGAGCAGTTGATTCATGCAGCAAGCAAAGTTTGGTCCTCTGGGCAAAACCACGACTAGAAGCACACAATGTGAAGGAATTAGTAGACCCACGATTAGAAGAAGCTTATGATTCCATTGAATTGAAGAGGACCATGCTTACTGCTTCCATGTGTCTCCACCATTCATCTTCCCACCGTCCATACATGAAACAGGTTGTGCAGCTGCTGAAGGGTGAAGAGGGACTCGTTGATGTTAAGCAGAAGTCAGTACCGACAAGATCCATCTTGTTAGATGCCAGCGACCTCGAAGAATATACTTGCTCTACTTACTTGAACGATCTCAATCGTCATAGGCAACTAGTCATGGAGTGA 1098 0.4727 MDSLEKQREFAGDDQESPRGILEIPVSGTESDHSGSSSIYSSSSPEKSSEAERVNVREGLGQPWKAMMESFKKKSAQRISAISLLTASYEMSRKSLRKRRMERIRSAEEGINLGAIPTKPSWRNFDYAELQAATDDFNPGSECLEWKTRFKVAIGVAQGLQYLHHDCQRRIIHRDIKASNILLNENYEAEISDFGLAKWLPEKWTHHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSCSKQSLVLWAKPRLEAHNVKELVDPRLEEAYDSIELKRTMLTASMCLHHSSSHRPYMKQVVQLLKGEEGLVDVKQKSVPTRSILLDASDLEEYTCSTYLNDLNRHRQLVME 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3610g00013 365 SMART serkin_6 54 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3610g00013 365 MobiDBLite consensus disorder prediction 29 49 - -
Pral3610g00013 365 Gene3D Transferase(Phosphotransferase) domain 1 131 333 - -
Pral3610g00013 365 PANTHER OS08G0249100 PROTEIN 141 332 IPR046958 -
Pral3610g00013 365 MobiDBLite consensus disorder prediction 1 16 - -
Pral3610g00013 365 ProSiteProfiles Protein kinase domain profile. 1 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3610g00013 365 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 133 332 - -
Pral3610g00013 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Pral3610g00013 365 Pfam Protein tyrosine and serine/threonine kinase 141 318 IPR001245 GO:0004672|GO:0006468
Pral3610g00013 365 SUPERFAMILY Protein kinase-like (PK-like) 141 318 IPR011009 -
Pral3610g00013 365 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3610g00013 Pral-Chr3610 91656 95953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3610g00013 140 364 Trihelix Transcription Factor Family AT1G70460 44.397 4.37e-55 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pral3610g00013 PK_Tyr_Ser-Thr 2.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3610g00013 - - pcin:129295504 442.195