Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3610g00010 ATGGATGCCACCGCCCAAACAGGGAAAATATATGTCGCTGTGAGTAATGATCTTCAAGATGGAATCAAAACCTTGAATTGGGCTCTCAATAAATGGAAATCTTATCCTATTTCCATTGTTATTCTCTACGTGAGTCACAATACTTCCAAGGATCATGTTACTACCCCTTTTGGCAAACTCCCAGCAAGATCTGTGAACGATGAGATGCTACCAGCTCTCAGGAAACAAGAGCAAGAGAAAATCGACAAACTTCTTTCCAAGTACATATCTTTCTGTGGGAAGGTGCCAGCTGAAATACTTGAAGTCGACAAATTTGACGAACCTATTCAAAAACGTGTAGTAGACATGATTATTGGTCTAGAAATAACCAAACTCGTCATTGGATTTTCAGTGATGAAGCCCTCCTGGAAATCACGAGGTGCCATAAGCGGATTGTTCTATATTCATCAGCATAAGCCTGAATTCTGTGAACTGTTCATTTTATGCGGAGGGAAACAAGTATTCATGAGAGGACAGAGCGATGAGAAGACCATGGAGGACGATAATGGGGTTGTGGTTGCCAGAATGAGAGACAAGATAACATTCAAAGATTGGTTAGATAAACTGTTGCCGAGAGAACCATTTGATTCCCCAGACTATCGGGGATCAGCAAATTCTTCATCAGCAAGTATGGAATCCCCAGGTTCACAGAACCAGTGGGAATTCTATCTCCAAGAGATTGAAACTTATTTCCAGGATTTGTTGTCTTCTCACACGAATGATGAACAATTGAGCCTTGAGCATCAAGACAGTGACATCTCGCGGATTAGTGGAGTTGAGCCAGATGATGTCAGGGAACAGAACAATTCTAATATGAGAGGAGCGGAAAGAATTGAGACGTTGAAAAGAAAACTGGAGGAGGCACATAAGATGATCCAGCTGAAGAGGAAAGAAGCTAAGGATCAAAGTGATAGACATGCAAAAGCTGAATGGGCTATTTGTTTATGCAACGCTCGGGCTCAAGAACTTGAAGGCAAAATCAAGGAAGAGATCAACATGAAGGAGGAGTTAGCAAAAGAATTGGAAGCAGAAAAGGAAACCATATACGAAACCAGACGTGATATTGAAGAAAGCAGAAAGAGGTTAAGCTCACTGTTGGAGCTTCAATTGGAGCTCTCAAACAAGCTTCAGATCTCCACACAGGCAAGGTCACAAGCTGAAATTCAATTGGAGAATGCGGCGAATACCAGGTCGGAGATGGTGGCCGAGATCGACGAGCTTAGGAGACAAAGAGACGTGCTTTACAGAAGGATCGAGTTTTGCAAAGAAAAGGACGCCATCGGAATGGCGGCGAGGCTGACGGAACCCAGTTTGCATTTTAGAGAGTACACGGTCGACGAGATCAGGTTGGCCACCGACGACTTCTCCGACCGCCTCATGCTGAAGTCCGGTGGTGCCGACTGGACCAACGTTTATAGAGGAAAGATCAACCATTCCACCGTAGCCATCAAGATCCCCCCTTCCAATCATGCCTTGTCACCCCAAGAATTCCAAGCTCAGGTGAGACTTCTTGGGGCTATTCGGCATCCTCACGTGCTGGCGATGGTGGGATTTTGCAGTGAACTAAAATGCATAGTTTTGGAATATATGAATAATGGCAGCTTGAGGGACATGCTATTTTCCAGGAGAAGAAACCGAGCCTTACCATGGCAAGACCGAATCAGGATAGCCGCCGAAGTTTGTTCGGGCTTGGGCTTTCTTCATTCGGCCCAGCCCAAACCCTTCATCCATGGGCACCTGACGCCTTCCAGCATCCTTCTCGATCGCAACCTCGTTGCCAAGATCAAAGGTTTTGGGTCCAACGAAGGCAACCCACAATCTGATGTAAGGGCCTTTGGAGTTTTGATCATGCATTTGCTGACGGGAAGAAACTGGGTGGGCCTGGTTGAGGAGGAGATGAAGATGGGAGAATCTTTGATGAAGGTTTTGGATGAGACTGCTGGGCCCTGGCAGTTGAATGTGGCCCAAAAGCTAGCAGACTTAGCCTTGAAGTGCATGGGCTTTCCTAATGGGCCTAAGCCCAAGGAAGGGCTAAGCATCGGAAATGTAATGCTGGAACTAAATGAGATCAGAAGAGAGGCTAATGACGAAGGTGCTAGAGGAGACACAACAAGATTTAGCGGAGGTGTAGATAAAGAAGAGCTTATGGATGTGCCCAACGTGTTTCTTTGTCCCATACTTCAGGAGGTGATGAAGAATCCACACGTGGCAGCGGATGGGTTTTCATATGAATTAGAAGCAATAGAAGAGTGGGTGGGTTCAGGGCATGAGAGATCGCCAATGACAAACGCAAGGCTGCCTCACTTGTTCTTTACCCCTAATCACTCCCTTCGTTCCCTAATTCTGGACTGGCAAACCAAAAGATCTTCTCATTTTAAATAA 2421 0.4564 MDATAQTGKIYVAVSNDLQDGIKTLNWALNKWKSYPISIVILYVSHNTSKDHVTTPFGKLPARSVNDEMLPALRKQEQEKIDKLLSKYISFCGKVPAEILEVDKFDEPIQKRVVDMIIGLEITKLVIGFSVMKPSWKSRGAISGLFYIHQHKPEFCELFILCGGKQVFMRGQSDEKTMEDDNGVVVARMRDKITFKDWLDKLLPREPFDSPDYRGSANSSSASMESPGSQNQWEFYLQEIETYFQDLLSSHTNDEQLSLEHQDSDISRISGVEPDDVREQNNSNMRGAERIETLKRKLEEAHKMIQLKRKEAKDQSDRHAKAEWAICLCNARAQELEGKIKEEINMKEELAKELEAEKETIYETRRDIEESRKRLSSLLELQLELSNKLQISTQARSQAEIQLENAANTRSEMVAEIDELRRQRDVLYRRIEFCKEKDAIGMAARLTEPSLHFREYTVDEIRLATDDFSDRLMLKSGGADWTNVYRGKINHSTVAIKIPPSNHALSPQEFQAQVRLLGAIRHPHVLAMVGFCSELKCIVLEYMNNGSLRDMLFSRRRNRALPWQDRIRIAAEVCSGLGFLHSAQPKPFIHGHLTPSSILLDRNLVAKIKGFGSNEGNPQSDVRAFGVLIMHLLTGRNWVGLVEEEMKMGESLMKVLDETAGPWQLNVAQKLADLALKCMGFPNGPKPKEGLSIGNVMLELNEIRREANDEGARGDTTRFSGGVDKEELMDVPNVFLCPILQEVMKNPHVAADGFSYELEAIEEWVGSGHERSPMTNARLPHLFFTPNHSLRSLILDWQTKRSSHFK 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3610g00010 806 SMART Ubox_2 734 797 IPR003613 GO:0004842|GO:0016567
Pral3610g00010 806 Gene3D Phosphorylase Kinase; domain 1 443 542 - -
Pral3610g00010 806 ProSiteProfiles U-box domain profile. 730 804 IPR003613 GO:0004842|GO:0016567
Pral3610g00010 806 Pfam Protein tyrosine and serine/threonine kinase 480 612 IPR001245 GO:0004672|GO:0006468
Pral3610g00010 806 SUPERFAMILY RING/U-box 725 802 - -
Pral3610g00010 806 ProSiteProfiles Protein kinase domain profile. 470 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3610g00010 806 Coils Coil 396 437 - -
Pral3610g00010 806 PANTHER OS02G0152300 PROTEIN 10 795 - -
Pral3610g00010 806 Coils Coil 333 374 - -
Pral3610g00010 806 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 729 806 IPR013083 -
Pral3610g00010 806 Gene3D Transferase(Phosphotransferase) domain 1 549 693 - -
Pral3610g00010 806 CDD RING-Ubox_WDSUB1-like 732 787 - -
Pral3610g00010 806 SUPERFAMILY Protein kinase-like (PK-like) 450 680 IPR011009 -
Pral3610g00010 806 Coils Coil 291 315 - -
Pral3610g00010 806 Pfam U-box domain 731 801 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3610g00010 Pral-Chr3610 63497 68041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3610g00010 1 804 U-box Gene Family AT5G65500 47.388 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral3610g00010 PK_Tyr_Ser-Thr 3.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3610g00010 - - pcin:129299872 1127.08