Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3610g00003 ATGATGGCTCTTCCCGGCACTCTGCAATTGTCCTGTGGATTGGGACCTCGTAGGAAGTGGAACCGGAATTACAATAAACAAGCTTTGCTCCTGAAACAAGATTGCAGGAGACTTCAACTCTCTCACCATGTAAACAGGCCAATGCCCTCCTTATCATGCAAATCCCAGTCTTTCAAGTGTCATTCTTTTCTAGTACCTGGCCAACCAAGTGAACTACCTGTTGTTAAGGTGGTCGCCGCAGCAATGACAAGGTCCTGTAATGTTTTACAAGGTAATCCTGTCATGGCAAAGTTAATTCCAGCAGTTGGTGTAATCACATTTGCCATATGGGGTGTCAGCCCATTACTATTTCTAACAAGAAAACTGTTTCTTCGGAGGGATAGCAATTGGAAGAAAAGCAGCACAAATTATATAGTAACTTCTTATATTCGGCCAATAATGTTATGGATTGGAGCTATACTTATGTGCAGAGCTTTGGAGTCAGTAGCTCTACCTACAGAAACTAGCCAGATCGTTAAGGAAAGGATTTTGAATTTTGTAAGATCATTGTCAACTGTACTTTCATTCGCGTATTGTTTATCAAGTGTGATTCAACAAGCACAGAGATTCTTTGTTCAGAATGCTGATGCCAATGAGGCAAGAAATATGGGATTCCAATTTGCTGGCAAAGCCGTGTACTCTGCCGTATGGATTGCCGCCTTTTCATTGTTCATGGAATTGCTGGGTTTCTCTACCCAGAGATGGCTTACTGCTGGAGGTCTGGGGACAGTTTTGCTTACTCTTGCTGGTCGTGAGATTTTTACAAACTTCCTTTCCAGCTTGATGATTCACGCTACTAGACCTTTTGTGGTGAATGAATGGATCCAAACAAAGATTGAAGGATACGAAGTCTCTGGTACTGTAGAGCATGTTGGTTGGTGGTCACCAACAATCATAAGAGGTGAAAATCGTGAGGCTGTTCATGTTCCAAACCACAAATTTACAATGAGTGTTGTGAGAAACCTTAGTCAGAAGACGCATTGGAGGATCAAAACCCACTTATGCATCAGTCATTTGGATGTCAGCAAGATTAACAACATTGTTGCTGACATGCGGAAAGTTTTGGCCAAAAATCCTCAAGTAGAGCAGCAGCGGCTGCACAGGAGAGTGTTTCTAGAAGATATAAATCCTGAAAATCAAGCTCTTACGATTCTGGTGTCTTGTTTTGTCAAGACCTCACGTCATGAAGAGTATTTTCGTGTTAAGGAAGTTATACTATTAGATCTTCTTAGAGTCATTGGTCATCATGGGGCTCGACTTGCAACACCAGTTCGTACTCTGCAAAAGAGATATAGTGATGATGACTTAGATAACATACCTTACGCAGATTCTTTTGTTGGTGGTGCTAGCACAGGACGTAACCGTCCATTATTATTGATTGAGCCACCTTACAAAATCAACTCTGATGATAAAACCAGAAGCCATAGAACACAAACCAAACATTCTGCAAGGACTGATGCCAAGGCTGGATCAACAGTGGTTGCAGACTCTAATGTTAGAGAAACTCCTTCAAACTCCAAGTCAGGTGCCAAAGCTGTGATGCCTAACTCTGATGTGAATGAAAAATCTGAAAATGCCACGTCATCTATAGTTCATCCCACCATACGTGAAGATGATCCACCGAAATCAGATTCAAATACTGAGGGAAATATTGGGTTGCCAGATATCTCTGCTTCCAATTCTAAAGCAAATTTAACCGACTCTGACAATACAATGTCGTGTTCAGCTTCAAATAATGGGCGTCCTTTGGATAAACCATCAAAACAACAAGGCGAAAGGAAACCAGCTGAACAGCCTCCTACATCCAGGCCTGATGTTGAAGAGAATATAGTCCTTGGTGTTGCATTGGAGGGATCAAAGAGAACCCTTCCTATTGAGGAGGGGATGGAGACTTCCAAGAAAGAGGCAAAGGAGATGACTGGATGGCAGGGTGGAAAGAAACCTTCAACGGCTGAATACGGGAAAGATAAATAG 2013 0.4223 MMALPGTLQLSCGLGPRRKWNRNYNKQALLLKQDCRRLQLSHHVNRPMPSLSCKSQSFKCHSFLVPGQPSELPVVKVVAAAMTRSCNVLQGNPVMAKLIPAVGVITFAIWGVSPLLFLTRKLFLRRDSNWKKSSTNYIVTSYIRPIMLWIGAILMCRALESVALPTETSQIVKERILNFVRSLSTVLSFAYCLSSVIQQAQRFFVQNADANEARNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQRWLTAGGLGTVLLTLAGREIFTNFLSSLMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGENREAVHVPNHKFTMSVVRNLSQKTHWRIKTHLCISHLDVSKINNIVADMRKVLAKNPQVEQQRLHRRVFLEDINPENQALTILVSCFVKTSRHEEYFRVKEVILLDLLRVIGHHGARLATPVRTLQKRYSDDDLDNIPYADSFVGGASTGRNRPLLLIEPPYKINSDDKTRSHRTQTKHSARTDAKAGSTVVADSNVRETPSNSKSGAKAVMPNSDVNEKSENATSSIVHPTIREDDPPKSDSNTEGNIGLPDISASNSKANLTDSDNTMSCSASNNGRPLDKPSKQQGERKPAEQPPTSRPDVEENIVLGVALEGSKRTLPIEEGMETSKKEAKEMTGWQGGKKPSTAEYGKDK 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3610g00003 670 MobiDBLite consensus disorder prediction 473 622 - -
Pral3610g00003 670 SUPERFAMILY Sm-like ribonucleoproteins 266 336 IPR010920 -
Pral3610g00003 670 MobiDBLite consensus disorder prediction 504 545 - -
Pral3610g00003 670 Pfam Mechanosensitive ion channel 223 432 IPR006685 GO:0016020|GO:0055085
Pral3610g00003 670 MobiDBLite consensus disorder prediction 634 670 - -
Pral3610g00003 670 Gene3D - 176 280 - -
Pral3610g00003 670 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 27 660 IPR045042 -
Pral3610g00003 670 MobiDBLite consensus disorder prediction 636 654 - -
Pral3610g00003 670 MobiDBLite consensus disorder prediction 558 598 - -
Pral3610g00003 670 Gene3D - 282 337 IPR023408 -
Pral3610g00003 670 MobiDBLite consensus disorder prediction 479 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3610g00003 Pral-Chr3610 16654 23295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3610g00003 40 665 Mechanosensitive Ion Channel Family AT5G10490 55.784 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3610g00003 K22047 - gmx:100789444 846.654