Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral360g00006 | ATGGAGACTTATCTGAACGAGAACTTTGGTGACGTGAAACCTAAGAACTCCTCGGAGGAAGCGCTTCAGCGATGGAGAAAACTTTGTTGGCTTGTGAAAAACCGTAAGAGGAGATTTCGCTTCACCGCTAATCTCTCCAAACGATTTGAAGCTGAAGCCATAAGACGCTCTAATCAGGAGAAGTTCCGAGTTGCCGTCTTGGTTTCACAAGCTGCACTGCAGTTTATCCATGGTCTAAAATTGTCAAGTGAATACACTGTACCAGAAGAAGTTAGAGCTGCAGGTTTTGAAATTTGTGCCGATGAGTTGGGATCAATTGTTGAAGGTCGTGATGTGAAGAAGCTAAAAATTCATGGAGGGATTGAGGGTATTTCAAACAAGCTCGCTACCTCTTTAGACGAGGGGTTATCAACATCTGAGCAATTATTAAATCAGAGGAAAGAGATATATGGAATTAACAGATTCACTGAAAGCCCGGCCCGGGGGTTTTGGATTTTTGTATGGGAAGCCCTTCAAGACACAACCCTCATGATACTTGCTGTTTGTGCCTTAGTCTCTTTGTTAGTTGGCATAGTAATGGAAGGATGGCCTAAGGGCGCACATGATGGAATTGGTATTGTTGCAAGCATATTGCTTGTTGTGTTTGTCACTGCCACGAGTGATTACAGGCAATCATTACAGTTTAAAGATCTAGATCGGGAGAAGAAAAAGATTACAATTCAGGTCACGCGAAATGGATTCAGACAGAAGATTTCAATATATGATTTACTTCCTGGTGATATTGTCCACTTAAATATTGGAGATCAGGTCCCTGCTGATGGACTCTTCGTGTCAGGTTTCTCTGTGTTGATAAATGAATCAAGTTTGACAGGAGAGAGCGAACCAGTGAATGTCAATGATCGAAACCCTTTTCTTCTTTCCGGAACTAAAGTCCAGGATGGATCTTGCAGGATGCTTGTGACTACTGTTGGAATGAGAACACAGTGGGGAAAACTAATGGCAACTCTAAGTGAAGGGGGAGATGATGAAACTCCCTTGCAGGTTAAGCTCAATGGCGTAGCTAACATTATTGGGAAAATAGGCCTTTTCTTTGCTGTTGTGACGTTCAGTGTTTTGGTCCAAGGACTGTTTAGCCGCAAACTACAAGAAGGGTCCCATTGGAAGTGGTCTAGCGGTGATGCTAGGGAAATTTTGGAATTCTTTGCCATTGCTGTTACTATTGTTGTTGTTGCGGTTCCTGAAGGTTTGCCATTAGCTGTAACATTGAGCCTTGCTTTTGCTATGAAAAAGATGATGAGTGATAAGGCTTTAGTCCGTCATCTGGCTGCTTGCGAAACAATGGGATCTGCCACTACTATTTGTAGCGACAAGACTGGCACTCTCACCACTAATCATATGACTGTTGTGAAGGCTTGCATATGTAGGAAGATAAAGGATGTAGGTAGCTCTAGAATCTCTTTTGATTTCTTGACTGACATTCCTGATTCTGCTATGAGAATTCTCCTTCAATCAATATTTAACAATACTGGAGGAGAAGTTGTCAGAGACAAAAATGACAAGATTGAGATTCTGGGAACGCCAACTGAGAGTGCGCTATTAGAATTTGGGCTATCCCTTCGTGGTGATTTCCTTCGGGAACGACAAATGTCAAAAATTGTGAAAGTGGAACCCTTTAACTCTCTCAAGAAGCGCATGGGAGTGGTTCTAGAGCTTCCTGATGGTAGCTTCAGAGCACATTGCAAAGGTGCTTCCGAGATTATTCTTGCTGCATGTGACAAGGTTATAGACTCTAATGGCAAGGTCGTTCCACTTGATGAAGAATCCATGAAGGAGTTAGAGAATACAATCGAAAAATTTGCCAGTGAAGCTCTGCGA | 1875 | 0.4251 | METYLNENFGDVKPKNSSEEALQRWRKLCWLVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLKLSSEYTVPEEVRAAGFEICADELGSIVEGRDVKKLKIHGGIEGISNKLATSLDEGLSTSEQLLNQRKEIYGINRFTESPARGFWIFVWEALQDTTLMILAVCALVSLLVGIVMEGWPKGAHDGIGIVASILLVVFVTATSDYRQSLQFKDLDREKKKITIQVTRNGFRQKISIYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESEPVNVNDRNPFLLSGTKVQDGSCRMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVANIIGKIGLFFAVVTFSVLVQGLFSRKLQEGSHWKWSSGDAREILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMSDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACICRKIKDVGSSRISFDFLTDIPDSAMRILLQSIFNNTGGEVVRDKNDKIEILGTPTESALLEFGLSLRGDFLRERQMSKIVKVEPFNSLKKRMGVVLELPDGSFRAHCKGASEIILAACDKVIDSNGKVVPLDEESMKELENTIEKFASEALR | 625 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral360g00006 | 625 | SUPERFAMILY | Calcium ATPase, transduction domain A | 239 | 334 | IPR008250 | - | |
| Pral360g00006 | 625 | SMART | Cation_ATPase_N_a_2 | 120 | 191 | IPR004014 | - | |
| Pral360g00006 | 625 | PRINTS | P-type cation-transporting ATPase superfamily signature | 454 | 468 | - | - | |
| Pral360g00006 | 625 | PRINTS | P-type cation-transporting ATPase superfamily signature | 285 | 299 | - | - | |
| Pral360g00006 | 625 | Gene3D | - | 17 | 77 | - | - | |
| Pral360g00006 | 625 | Gene3D | - | 509 | 625 | IPR023299 | GO:0000166 | |
| Pral360g00006 | 625 | Gene3D | - | 214 | 311 | - | - | |
| Pral360g00006 | 625 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 119 | 448 | IPR023298 | - | |
| Pral360g00006 | 625 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 463 | 625 | IPR023299 | GO:0000166 | |
| Pral360g00006 | 625 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 456 | 462 | IPR018303 | - | |
| Pral360g00006 | 625 | Pfam | Cation transporter/ATPase, N-terminus | 119 | 186 | IPR004014 | - | |
| Pral360g00006 | 625 | Pfam | Cation transport ATPase (P-type) | 515 | 594 | - | - | |
| Pral360g00006 | 625 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 112 | 625 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Pral360g00006 | 625 | PRINTS | Sodium/potassium-transporting ATPase signature | 204 | 224 | - | - | |
| Pral360g00006 | 625 | PRINTS | Sodium/potassium-transporting ATPase signature | 447 | 468 | - | - | |
| Pral360g00006 | 625 | PRINTS | Sodium/potassium-transporting ATPase signature | 578 | 596 | - | - | |
| Pral360g00006 | 625 | NCBIfam | HAD-IC family P-type ATPase | 395 | 476 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Pral360g00006 | 625 | NCBIfam | HAD-IC family P-type ATPase | 206 | 377 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Pral360g00006 | 625 | FunFam | Calcium-transporting ATPase | 17 | 77 | - | - | |
| Pral360g00006 | 625 | FunFam | Calcium-transporting ATPase | 217 | 337 | - | - | |
| Pral360g00006 | 625 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 49 | IPR024750 | GO:0005516 | |
| Pral360g00006 | 625 | PANTHER | CATION TRANSPORTING ATPASE | 77 | 625 | - | - | |
| Pral360g00006 | 625 | Pfam | E1-E2 ATPase | 237 | 432 | - | - | |
| Pral360g00006 | 625 | Gene3D | - | 312 | 502 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral360g00006 | Pral-Chr360 | 33849 | 37479 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral360g00006 | 1 | 625 | Primary Pumps ATPases | AT1G27770 | 79.840 | 0.0 | 1016 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral360g00006 | K01537 | - | qsa:O6P43_015991 | 1078.16 |