Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3601g00024 ATGTCCGCCTCATCCACTGCCTCCTTTTCACCGGACCAGCACCTCCTGTCTCCCTCCGACCAGCTCTGTTATGTCCATTGCGACTTCTGTGACACTTTCCTCGCGGTGAGTGTTCCATGCACCAGCGTGTTCAAGACTGTCACTGTGCGATGTGGTCATTGCACCAACCTTCTCTCTGTCAATATGCGTAGTCTGCTTCTTCCTTCTGCCAATCAGTTTCATCTCGGACACTCCTTCAATCCTCAAAATCTTCTGGAGGATATTCGAAGTGCACCTTCATCAAATATGGTGATGAATCAGCTACAGAATAACCCAAATGATTCTGTTACGAGTATGAGTGCCATGCGAGCACCACCTGAGGAAATCCCTAAGCCTCCACCAGCTGACAGACCTCCAGAGAAGAGACAGAGAGTTCCATCTGCTTACAATCGATTCATCAAGGACGAGATCCAACGTATCAAAGCTGGGAATCCTGATATAAGCCACAGAGAGGCTTTCAGTGCTGCTGCAAAGAATTGGGCCCATTTCCCCCATATCCACTTCGGACTGATGCCTGATCATCAACCCGTGAAGAAAGCTAATATCCGCCAGGAAGGAGAGGAAGTACTTATTAAAGATGGGTTTTATGCTCCAGCAAACGTAGGGGTCTCCCCTTTTTAG 660 0.4848 MSASSTASFSPDQHLLSPSDQLCYVHCDFCDTFLAVSVPCTSVFKTVTVRCGHCTNLLSVNMRSLLLPSANQFHLGHSFNPQNLLEDIRSAPSSNMVMNQLQNNPNDSVTSMSAMRAPPEEIPKPPPADRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKANIRQEGEEVLIKDGFYAPANVGVSPF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3601g00024 219 CDD HMG-box_SF 137 173 - -
Pral3601g00024 219 Pfam YABBY protein 18 183 IPR006780 GO:0007275
Pral3601g00024 219 PANTHER PROTEIN YABBY 6-RELATED 5 193 IPR006780 GO:0007275
Pral3601g00024 219 Gene3D High mobility group box domain 123 179 IPR036910 -
Pral3601g00024 219 MobiDBLite consensus disorder prediction 99 113 - -
Pral3601g00024 219 SUPERFAMILY HMG-box 128 177 IPR036910 -
Pral3601g00024 219 MobiDBLite consensus disorder prediction 99 137 - -
Pral3601g00024 219 FunFam Axial regulator YABBY 128 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3601g00024 Pral-Chr3601 721018 725442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3601g00024 29 217 C2C2-YABBY Transcription Factor Family AT4G00180 61.429 9.23e-68 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pral3601g00024 YABBY 3.8e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3601g00024 K25796 - gmx:100781267 360.147