Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3600g00005 ATGAAGTTAAGATGGCATGTCCAGTTTGTCGAGGAACATGTTCCTGTAAAGACTGCTTGGCAAGTCAATATAAAGACAATGAAAGAATATTTGGCGTGTAAAAGCAGAGTGGACAGAATTTTGTGTTTCCACTATATGATCTGCATGCTTCTTCCTGTATTAAAACAAATCAGTGAAGACCATAATATTGAACTAGAAGCAGAAGTGAAAAGTAAAGAGAAAAGAACCTCTGATATTCAAATCAAGCAGTTTGAGTCTTGCTGTAATGACCAAAACTGCTGGATACCGAATAAACTGAAAGATGGCATTGCCAGTGAAAACCACGTTTTGGATGAGGTCATTTCCAATGGCAATTTGACTGCTACTTCATCACCAGATGGCACAATTTGTAATGGTTCTGGCAATATATCTTGTTCCCCCAAAGAGCTTGGTGGCTGTGGTGATAGCCTCCTTGATTTGAGATGTCTTTTTCCTGTAAGTTTGATCAAAGAAATGAAAACAAAAGCTGAAGAAATATCTTGCTGCTATGACTTTCCTGAATCATTGGATAAAAGTTCAAGCTGCTCGCTTTGTCTCAATTCTGATAATAAGATTGATAGAGACAAACAATGGCAAGAAGCAGCTCTAAGAGAAGATTCCGATGATAATTGCTTGTTTTATCCCACAGTTTTGGACATCAGTCGTGATAATTTTGAACACTTTCAGAAGCACTGGAGAAAAGGCCATCCAGTGGTAGTGCGTGATGTTCTCCAAAGTAAATCAAATCATAGCTGGGATCCACTGGCCATGTTCTGTGCTTATCTTGAGCAGAGTATCACAAGATATCAGAATGATAAGGACTTACTTGAAGCTTGTTTGGATTGGTGTGAGGTAGAAATTAACATTAGGCAGTATTTTTCTGGGTCTCTAAGATGTCAACCACAGAAAAATAATTGGCATTATATGCTGAAATTGAAGGGCTGGCTTTCTTCCCAACTATTCAAAGAACAATTTCCGACTCATTATTATCAAGTAATTGCTGCTCTACCACTTCAAGAATACATGAATCCCATGTCTGGTATTCTGAATTTAGCAGCAAATTTGCCACAAGGGAGTGTAAAACATGACATAGGGCCATTTGTCTATATGTCATATGGCTGTGCTGATGAACAAGTTGATTCTGTGACAAAACTCTGTTACGACTCATATGATGTGGTTAATATCATGGCGCATTCAACAGATGTCCCTCTCTCTACAGAACAACTTGATAAAATAAGAAAGTTATTGAGAAAGCACCGAAATCTGTGTCAAAGGGAGTCTCCCAAAATTATTACTGGGAAGATAATGGGACAAAGTTTGAAAGAAAATTCATTATTGCATGCTGAAGATAAGGAACAAAATGGAGTGCAGAGTATGGTTAGAGGGCAAATGAATTTCTTCCGGAGGGTCAATAGAACAACATTAATCTCTACAGAGGCAGGAACAGCTAGTCCGAGTACGGACAGCAATATTTCCCAGGGTGGAGAATGTGATTCAGATACAGATTCTGATTCTGATTTTGAATCCAATGTACTTCACGGGACAACCCAGAACACTCCATTGTCTACGCTTGATAATCCCAGATATTCCTGTGATAGCGCAAGTAATGGTAGAAATAAAAACCTAAGTGATTATTCTGGTGCCCAGTGGGATGTATTTCGCAGACAAGACGTTCCAAAACTAATAGAATACCTTGAAAGACATTGTATTGAATTTGCTGATACCCAGAACCATAAAAATAAGATGATTCACCCACTTCTAGATCAGATCTTCTTTCTTGACAGTACTCACAAAATGAGGCTTAAAGAGGAGTTTGAAATTGAACCGTGGACTTTTGAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGATGCCCATACCAGATAAGGAATCCAAAGTGTTGTGTTCATGTGACGCTTGAATTTGTGTCCCCTGAAAATGTTCCTGAGTGTATGGAGTTGATTGATGAAGTCCGTCTACCTCCTGAAGGACATAAAGCAAAAGTGGATAAGCTGGAGATGGAGAAAATGGCCCTTTATAGCATGAGAACAGCAATAAAAGAAATAGGAGATCTTACATGTAAAAAGTGA 2112 0.3873 MKLRWHVQFVEEHVPVKTAWQVNIKTMKEYLACKSRVDRILCFHYMICMLLPVLKQISEDHNIELEAEVKSKEKRTSDIQIKQFESCCNDQNCWIPNKLKDGIASENHVLDEVISNGNLTATSSPDGTICNGSGNISCSPKELGGCGDSLLDLRCLFPVSLIKEMKTKAEEISCCYDFPESLDKSSSCSLCLNSDNKIDRDKQWQEAALREDSDDNCLFYPTVLDISRDNFEHFQKHWRKGHPVVVRDVLQSKSNHSWDPLAMFCAYLEQSITRYQNDKDLLEACLDWCEVEINIRQYFSGSLRCQPQKNNWHYMLKLKGWLSSQLFKEQFPTHYYQVIAALPLQEYMNPMSGILNLAANLPQGSVKHDIGPFVYMSYGCADEQVDSVTKLCYDSYDVVNIMAHSTDVPLSTEQLDKIRKLLRKHRNLCQRESPKIITGKIMGQSLKENSLLHAEDKEQNGVQSMVRGQMNFFRRVNRTTLISTEAGTASPSTDSNISQGGECDSDTDSDSDFESNVLHGTTQNTPLSTLDNPRYSCDSASNGRNKNLSDYSGAQWDVFRRQDVPKLIEYLERHCIEFADTQNHKNKMIHPLLDQIFFLDSTHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNPKCCVHVTLEFVSPENVPECMELIDEVRLPPEGHKAKVDKLEMEKMALYSMRTAIKEIGDLTCKK 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3600g00005 703 SMART cupin_9 331 666 IPR003347 -
Pral3600g00005 703 MobiDBLite consensus disorder prediction 483 532 - -
Pral3600g00005 703 SUPERFAMILY Clavaminate synthase-like 229 686 - -
Pral3600g00005 703 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 121 702 IPR045109 GO:0032454|GO:0033169
Pral3600g00005 703 Coils Coil 55 75 - -
Pral3600g00005 703 Pfam JmjC domain, hydroxylase 551 649 IPR003347 -
Pral3600g00005 703 Gene3D Cupin 222 675 - -
Pral3600g00005 703 ProSiteProfiles JmjC domain profile. 350 666 IPR003347 -
Pral3600g00005 703 MobiDBLite consensus disorder prediction 514 532 - -
Pral3600g00005 703 MobiDBLite consensus disorder prediction 483 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3600g00005 Pral-Chr3600 234296 239122 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral3600g00005 JmjC 1e-11 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3600g00005 K15601 - gmx:100799234 854.358