Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral35g00011 ATGGACAGAAGTATTGGAAGCGTCATGAAAGCAGTTGAACCATTGCCAGAGGATTTTGATCCAAAGACTGTGATTAAGGATCCTGTACCACCGACAGTTGAAAACAATGGGAGTGTTTATGCGGTGACCGAGATGAGTGAGGATAAAAGTAAAAGAGAAATAGTACTAGGCAGGAATGTTCATACCACATGCTTGGAAGTCACAGAACCAGATGCTGATGATGAGGTGACAGGGGACAGGGAGGCTTATATGGCAAGTGTTTTGGCTAGATACAGAAAATCTCTGATGGAAAGGACGAAGCATCATTTAGGTTATCCCTATAATTTGGATTTCGACTATGGTGCCCTTGCCCAGCTGCAGCACTTTTCTATAAACAATTTAGGAGATCCATTCATTGAAAGTAACTATGGCGTCCACTCACGGCAGTTTGAAGTAGGTGTTTTGGATTGGTTTGCCCGATTATGGGAGATTGAGAAAAATGAATACTGGGGCTATATAACAAACTGTGGCACAGAAGGGAATCTACATGGCATTCTAGTTGGGAGAGAGGTTTTCCCAGATGGGATTCTGTATACCTCACTGGAAACGCATTATTCTGTTTTCAAAGCTGCTCGCATGTACAGAATGGAATGTGTGAAAGTTGACACGCACTGTACCGGTGAGATTGACTGTGATGATTTCAAGGCCAAGATTATTCGTAACAAAGACAAGCCAGCAATTGTAAATGTGAATATAGGCACAACTGTCAAAGGAGCTGTGGATGATCTTGATCTAGTAATAAAGACACTTGAAGAAGCAGGATTTTCACACGACCGATTCTACATCCACTGCGATGGAGCTTTATTTGGTCTCATGATGCCTTTTGTCAAACGCGCTCCAAAAGTCTCTTTTAAGAAGCCTATAGGCAGTGTGAGTGTTTCTGGCCACAAATTTGTGGGGTGCCCTATGCCTTGTGGTGTGCAGATAACAAGATTGGAGCACGTCAATGTTCTCTCCAGGAATGTGGAGTACCTGGCTTCTAGGGATGCCACAATCATGGGCAGTCGAAACGGACATGCTCCCATTTTCCTCTGGTACACCTTAAACCGAAAGGGATACAGGGGTTTCCAGAAAGAAGTACAGAAATGCCTGAGGAATGCACATTACTTGAAAGACCGCCTCAGAGACGCCGGGATCGGCGCTATGCTTAATGAGCTAAGCAGCACAGTTGTGTTTGAGCGGCCACATGATGAGGAGTTTACTCGCATGTGGCAACTAGCATGCCAAGGCAACATTGCTCATGTTGTTGTGATGCCGAACATTACAATTGAGAAGCTTGACAAATTTTTGGAGGAGTTTGTGCAGAAACGAGCCAAATGGTTTGAAGATGGGAAGTGCCAGCCTCGCTGTATTGCGTCTGATGTGGGTGAGAAGAGTTGCCTTTGTGCCTTGCACAGGTGA 1440 0.4472 MDRSIGSVMKAVEPLPEDFDPKTVIKDPVPPTVENNGSVYAVTEMSEDKSKREIVLGRNVHTTCLEVTEPDADDEVTGDREAYMASVLARYRKSLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYTSLETHYSVFKAARMYRMECVKVDTHCTGEIDCDDFKAKIIRNKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEEAGFSHDRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHVNVLSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLRDAGIGAMLNELSSTVVFERPHDEEFTRMWQLACQGNIAHVVVMPNITIEKLDKFLEEFVQKRAKWFEDGKCQPRCIASDVGEKSCLCALHR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral35g00011 479 SUPERFAMILY PLP-dependent transferases 98 450 IPR015424 -
Pral35g00011 479 Gene3D Aspartate Aminotransferase, domain 1 362 450 IPR015422 GO:0003824
Pral35g00011 479 Gene3D - 118 361 IPR015421 GO:0003824
Pral35g00011 479 FunFam Serine decarboxylase 1 118 361 - -
Pral35g00011 479 PANTHER - 42 479 - -
Pral35g00011 479 Pfam Pyridoxal-dependent decarboxylase conserved domain 189 400 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral35g00011 479 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 303 324 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral35g00011 Pral-Chr35 105805 108923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral35g00011 202 385 Calmodulin-binding Proteins AT1G65960 26.425 9.23e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral35g00011 K25193 - qsa:O6P43_012276 848.195