Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3596g00001 ATGGCACAACTTATCAACCTCACAATTCTAGTGATGCTTCTCTTGTCTCTCTTCTCAATTCATGTTGTAGCTGAGCCATCCTTCAACAAACCTCGTCGTGGGTACAATCCTCAAACAATCGCTTATATAAAAGCCTCTTGTCAAACCACTATGTACCCAAATCTGTGCCTTCGCTGCTTATATAAATTTGCCAATTCAAATATTCAAAGCCCACAACACTTGACTCATGTGGCTCTATCTGTGAGTCTCTCACGAGCACTACACACAAGAGATTACTTGCTGCGAGTCGCCAAACAATTCAAGGCAATCAAGAATAGTAACAATAGTAGAGACTATGTAGTTCTGCAAGATTGCTTGAAGCAAATCGATGATAGTGTGGACCAGCTTGGACTTTCAATAAAAGAGCTTGGGCGGTTGAAAAAGATCCCAAACACTTTTATCAATGATGGTGTCTTGTGGCATATAAGTAACGTTGAGACGTGGGTAAGCACTGCCCTTACTGATGCGAGCACTTGTGTCGATTACTTCCCAGGTCATAGGATGAGTAAGATGAAGGCTACAATAAGGGGTAAAGTTTTGAACGTTGCACAAGTCACTAGCAATGCACTTGCTTTATTTCAGAGATATGCAACCAAGTACCGAGAAGCAGCCGCCGCCGCAGCCAAAAGACCCTAA 675 0.4267 MAQLINLTILVMLLLSLFSIHVVAEPSFNKPRRGYNPQTIAYIKASCQTTMYPNLCLRCLYKFANSNIQSPQHLTHVALSVSLSRALHTRDYLLRVAKQFKAIKNSNNSRDYVVLQDCLKQIDDSVDQLGLSIKELGRLKKIPNTFINDGVLWHISNVETWVSTALTDASTCVDYFPGHRMSKMKATIRGKVLNVAQVTSNALALFQRYATKYREAAAAAAKRP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3596g00001 224 FunFam Pectinesterase inhibitor 3 38 210 - -
Pral3596g00001 224 NCBIfam pectinesterase inhibitor domain 9 208 IPR006501 GO:0004857
Pral3596g00001 224 CDD PMEI-like_3 45 211 - -
Pral3596g00001 224 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 209 IPR035513 -
Pral3596g00001 224 Pfam Plant invertase/pectin methylesterase inhibitor 42 205 IPR006501 GO:0004857
Pral3596g00001 224 SMART PMEI_2 38 205 IPR006501 GO:0004857
Pral3596g00001 224 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 205 - -
Pral3596g00001 224 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3596g00001 Pral-Chr3596 165570 166322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3596g00001 22 207 Carbohydrate Esterase AT3G14310 25.000 3.11e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3596g00001 - - pcin:129315147 335.88