Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral358g00001 ATGGAAGAAAGAGACTGTTGTTCGAGGGATTCGACGATCACGACGAGCAGAAGCGGCCCAGAGAAGCGGAAGCAGCAGAGACAACACCAAAAAGCAGCGAAGGACAAGCCATACAGAGGGATAAGGATGAGGAAGTGGGGCAAGTGGGTGGCTGAGATCAGAGAACCCAACAAGAGGTCCAGGATTTGGCTCGGTTCTTACACCACGCCCATCGCCGCCGCACGCGCATACGACACCGCCGTTTATTACCTCCGAGGCCCTTCTGCTTCCCTCAACTTCCCCGAGCTGTTGTTCCAAGAAGACGACGCCCTCAGCCGCGGCGACATGTCCGCCGATTCCATACGCAAGAAAGCCACCGAAGTCGGCGCCAGAGTTGACGCCCTCCAAACAGCCCTTCACGCCTCCTCTCCCTCCACCAGTTCTACCCAAACCACCTCAGACAAACCCGACTTGAATGAGTACCCGCAACCCGAAGACTCCGTCGAAGACTATAATTAG 498 0.5643 MEERDCCSRDSTITTSRSGPEKRKQQRQHQKAAKDKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVYYLRGPSASLNFPELLFQEDDALSRGDMSADSIRKKATEVGARVDALQTALHASSPSTSSTQTTSDKPDLNEYPQPEDSVEDYN 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral358g00001 165 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Pral358g00001 165 ProSiteProfiles AP2/ERF domain profile. 37 94 IPR001471 GO:0003700|GO:0006355
Pral358g00001 165 MobiDBLite consensus disorder prediction 1 37 - -
Pral358g00001 165 SMART rav1_2 37 100 IPR001471 GO:0003700|GO:0006355
Pral358g00001 165 PRINTS Ethylene responsive element binding protein signature 38 49 IPR001471 GO:0003700|GO:0006355
Pral358g00001 165 PRINTS Ethylene responsive element binding protein signature 76 96 IPR001471 GO:0003700|GO:0006355
Pral358g00001 165 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 21 160 - -
Pral358g00001 165 MobiDBLite consensus disorder prediction 128 165 - -
Pral358g00001 165 Pfam AP2 domain 38 86 IPR001471 GO:0003700|GO:0006355
Pral358g00001 165 MobiDBLite consensus disorder prediction 131 151 - -
Pral358g00001 165 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Pral358g00001 165 FunFam Ethylene-responsive transcription factor 2 36 95 - -
Pral358g00001 165 SUPERFAMILY DNA-binding domain 37 95 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral358g00001 Pral-Chr358 4272 5908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral358g00001 22 147 AP2-EREBP Transcription Factor Family AT1G46768 66.165 1.56e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral358g00001 AP2 1.8e-11 CL0081