Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3587g00023 ATGCAAGGAGGGTTAGGTCAAAACTCAAATCTTCCTTCAGGATCCATAGATAAGACAAGGGTTTTAGATGTTAAACCTCTGCGTACTTTGGACCCTGTGTTTCCAAATTCAGCTAGGGCTACTACCTTCGACGGCGCCTGTCCCACTGGGTTTTATTCCTTTTTCCCATTTGGTGCATCTCAAGGACCTCAGGCATCGCCTCCTAAGGTTCCCATGCCTGCTCCACTGCGGTCTTTTAGAAGCTCTGACACTGGAGAAGCAACACCGGCTGAGTTTCCTGTAGCATCCAATGGAGAAAATACTGATAGCCACGATCGCGCGGCACCAAACAAATCTAGATCCTCCAAAAAGAAGCCCAAGATAAGTCAAGATCTGCAAATTGATGTGAGTTCATTATTGGGCATTGGCAAAAATGAGCGTGAAGATGGTAATAGGGAGTTGGTTAATCTTCTGCTCATGACATTTGATGCTCTTAGGAGAAGGATCGGCCAGCTTGAAGATTCCAAAGAATTGACACTAGGGTTGAGCAAGCGAGCGGATATGAGAGCTGGCAACATTTTGATGAGTGCAGGCATTCGAACAAACCTGAGGAAACGAATAGGAGCTGTGCCTGGGGTTGAGATTGGGGACATTTTCTTTTTCCGACTAGAATTATGTATTGTGGGTCTGCATAGTCAGTCTATGGGTGGGATCGACTATACAAATATGGGTGGTAAGAATGAGTCTGATCCTCTGGCTTTAGCTATTGTTTCATCCGGAAAATATAATGACAATGCAGAGGATAGTGATATTTTGATTTATAGTGGTCAGGGTGGTGATAAGGGGGATGATCAGAAGCTAGAAAGGGGTAATCTTGCTTTGGATAGAAGCTTGCGACAGAAGACTGATGTCAGAGTAATACGGGGCATGAAAGATCAAATGAATTCAACTTCAAAGGTCTATATCTATGATGGGCTGTATAAAATCCAGGATTCATGGGTAGAAAAAGGGAAATCTGGTGGTGGTGTATTCAAGTACAAGTTGGTGAGAGTTCCGGGGCAGCCCAGAGCCTTTGCTGCTTGGAAATCTATTGAAAAGTGGAAAGGTGGCATCGCTTCTAGGACTGGGCTTATTCTTGCAGACCTCTCCTCAGGAGCTGAGAAAATTCCTGTGTCGCTTGTTAATGATTTTGATGATGAGAAAGCACCTGGCTATTTCACTTATCTCCATTCTCTTAGATATTCAAAATCCTTCATTGTTTCACATCCTTATGATTTCTGCAACTGTCAAAAAGATTGCATTCCTGGCGATTTGAACTGCTCTTGCATTCGGAGAAATGAAGGTGATTTTCCATATACTGGGAACGGCATTTTAGTGAGTCGGAAGAAATTGGTTTATGAATGTGGCCTTTCATGTCAATGTTCTCCTAACTGCAAAAATCGTGTATCCCAAACTGGTTTGAAGTACCGTATGGAGGTTTTCAAAACAAAGGATAGAGGATGGGGCCTTCGATCATTGGATCCTATCCGTGCAGGTACCTTTATTTGTGAGTATGCTGGAGAAGTTATTGACAGAGCCAGGGTAAGATGGAATGGCAATAATGATGAGTATGTTTTTGACACGACTCGAATATATCAACCATTCAAGTGGAACTATGAACCTAAGTTACTTGAAGAAGCTAGTTCAAATGATTCTAGCGAGGATTATGATATTCCATCTCCTGTAATTATTAGTGCCAAGAATGTTGGAAATGTGGCGAGATTCATGAATCATAGTTGCTCCCCAAATGTCTTTTGGCAGCCAGTTTTATATGAAGAAAACAATCAACCTGTTGTCCATATTTCCTTTTTTGCCCTTAGACACATTCCTCCACTGACAGAATTGACATATGATTATGGGGCTGCCCGATCTGATTCTACTGTGGGTCACATTGCACCCAGATGGAAAAAGAAATGCTTATGTGCATCATCAAAATGCCGGGGTTCTTTTGGCTGA 1974 0.426 MQGGLGQNSNLPSGSIDKTRVLDVKPLRTLDPVFPNSARATTFDGACPTGFYSFFPFGASQGPQASPPKVPMPAPLRSFRSSDTGEATPAEFPVASNGENTDSHDRAAPNKSRSSKKKPKISQDLQIDVSSLLGIGKNEREDGNRELVNLLLMTFDALRRRIGQLEDSKELTLGLSKRADMRAGNILMSAGIRTNLRKRIGAVPGVEIGDIFFFRLELCIVGLHSQSMGGIDYTNMGGKNESDPLALAIVSSGKYNDNAEDSDILIYSGQGGDKGDDQKLERGNLALDRSLRQKTDVRVIRGMKDQMNSTSKVYIYDGLYKIQDSWVEKGKSGGGVFKYKLVRVPGQPRAFAAWKSIEKWKGGIASRTGLILADLSSGAEKIPVSLVNDFDDEKAPGYFTYLHSLRYSKSFIVSHPYDFCNCQKDCIPGDLNCSCIRRNEGDFPYTGNGILVSRKKLVYECGLSCQCSPNCKNRVSQTGLKYRMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVIDRARVRWNGNNDEYVFDTTRIYQPFKWNYEPKLLEEASSNDSSEDYDIPSPVIISAKNVGNVARFMNHSCSPNVFWQPVLYEENNQPVVHISFFALRHIPPLTELTYDYGAARSDSTVGHIAPRWKKKCLCASSKCRGSFG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3587g00023 657 ProSiteProfiles YDG domain profile. 201 343 IPR003105 -
Pral3587g00023 657 ProSiteProfiles Post-SET domain profile. 641 657 IPR003616 -
Pral3587g00023 657 ProSiteProfiles Pre-SET domain profile. 418 479 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral3587g00023 657 MobiDBLite consensus disorder prediction 62 123 - -
Pral3587g00023 657 Gene3D - 184 362 IPR036987 -
Pral3587g00023 657 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 61 652 - -
Pral3587g00023 657 SMART G9a_1 196 347 IPR003105 -
Pral3587g00023 657 Gene3D SET domain 364 656 IPR046341 -
Pral3587g00023 657 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 184 362 - -
Pral3587g00023 657 Pfam SAD/SRA domain 200 347 IPR003105 -
Pral3587g00023 657 SUPERFAMILY SET domain 382 654 IPR046341 -
Pral3587g00023 657 ProSiteProfiles SET domain profile. 482 626 IPR001214 GO:0005515
Pral3587g00023 657 SMART preset_2 372 466 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral3587g00023 657 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 59 657 IPR025794 GO:0016571
Pral3587g00023 657 SMART set_7 482 632 IPR001214 GO:0005515
Pral3587g00023 657 SUPERFAMILY PUA domain-like 183 364 IPR015947 -
Pral3587g00023 657 Pfam Pre-SET motif 376 474 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral3587g00023 657 Pfam SET domain 493 626 IPR001214 GO:0005515
Pral3587g00023 657 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3587g00023 Pral-Chr3587 460150 464303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3587g00023 1 657 Su(var)3-9 homologs AT1G73100 51.744 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral3587g00023 SAD_SRA 2.6e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3587g00023 K24405 - gmx:100812173 856.284