Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3587g00022 ATGCCTGCTCCACTGCGGTCTTTTAGAAGCTCTGACACTGGAGAAGCAACACCGGCTGAGTTTCCTGTAGCATCCAATGGAGAAAATACTGATAGCCACGATCGCGCGGCACCAAACAAATCTAGATCCTCCAAAAAGAAGCCCAAGATAAGTCAAGATCTGCAAATTGATGTGAGTTCATTATTGGGCATTGGCAAAAATGAGCGTGAAGATGGTAATAGGGAGTTGGTTAATCTTCTGCTCATGACATTTGATGCTCTTAGGAGAAGGATCGGCCAGCTTGAAGATTCCAAAGAATTGACACTAGGGTTGAGCAAGCGAGCGGATATGAGAGCTGGCAACATTTTGATGAGTGCAGGCATTCGAACAAACCTGAGGAAACGAATAGGAGCTGTGCCTGGGGTTGAGATTGGGGACATTTTCTTTTTCCGACTAGAATTATGTATTGTGGGTCTGCATAGTCAGTCTATGGGTGGGATCGACTATACAAATATGGGTGGTAAGAATGAGTCTGATCCTCTGGCTTTAGCTATTGTTTCATCCGGAAAATATAATGACAATGCAGAGGATAGTGATATTTTGATTTATAGTGGTCAGGGTGGTGATAAGGGGGATGATCAGAAGCTAGAAAGGGGTAATCTTGCTTTGGATAGAAGCTTGCGACAGAAGACTGATGTCAGAGTAATACGGGGCATGAAAGATCAAATGAATTCAACTTCAAAGGTCTATATCTATGATGGGCTGTATAAAATCCAGGATTCATGGGTAGAAAAAGGGAAATCTGGTGGTGGTGTATTCAAGTACAAGTTGGTGAGAGTTCCGGGGCAGCCCAGAGCCTTTGCTGCTTGGAAATCTATTGAAAAGTGGAAAGGTGGCATCGCTTCTAGGACTGGGCTTATTCTTGCAGACCTCTCCTCAGGAGCTGAGAAAATTCCTGTGTCGCTTGTTAATGATTTTGATGATGAGAAAGCACCTGGCTATTTCACTTATCTCCATTCTCTTAGATATTCAAAATCCTTCATTGTTTCACATCCTTATGATTTCTGCAACTGTCAAAAAGATTGCATTCCTGGCGATTTGAACTGCTCTTGCATTCGGAGAAATGAAGGTGATTTTCCATATACTGGGAACGGCATTTTAGTGAGTCGGAAGAAATTGGTTTATGAATGTGGCCTTTCATGTCAATGTTCTCCTAACTGCAAAAATCGTGTATCCCAAACTGGTTTGAAGTACCGTATGGAGGTTTTCAAAACAAAGGATAGAGGATGGGGCCTTCGATCATTGGATCCTATCCGTGCAGGTACCTTTATTTGTGAGTATGCTGGAGAAGTTATTGACAGAGCCAGGGTAAGATGGAATGGCAATAATGATGAGTATGTTTTTGACACGACTCGAATATATCAACCATTCAAGTGGAACTATGAACCTAAGTTACTTGAAGAAGCTAGTTCAAATGATTCTAGCGAGGATTATGATATTCCATCTCCTGTAATTATTAGTGCCAAGAATGTTGGAAATGTGGCGAGATTCATGAATCATAGTTGCTCCCCAAATGTCTTTTGGCAGCCAGTTTTATATGAAGAAAACAATCAACCTGTTGTCCATATTTCCTTTTTTGCCCTTAGACACATTCCTCCACTGACAGAATTGACATATGATTATGGGGCTGCCCGATCTGATTCTACTGTGGGTCACATTGCACCCAGATGGAAAAAGAAATGCTTATGTGCATCATCAAAATGCCGGGGTTCTTTTGGCTGA 1761 0.4202 MPAPLRSFRSSDTGEATPAEFPVASNGENTDSHDRAAPNKSRSSKKKPKISQDLQIDVSSLLGIGKNEREDGNRELVNLLLMTFDALRRRIGQLEDSKELTLGLSKRADMRAGNILMSAGIRTNLRKRIGAVPGVEIGDIFFFRLELCIVGLHSQSMGGIDYTNMGGKNESDPLALAIVSSGKYNDNAEDSDILIYSGQGGDKGDDQKLERGNLALDRSLRQKTDVRVIRGMKDQMNSTSKVYIYDGLYKIQDSWVEKGKSGGGVFKYKLVRVPGQPRAFAAWKSIEKWKGGIASRTGLILADLSSGAEKIPVSLVNDFDDEKAPGYFTYLHSLRYSKSFIVSHPYDFCNCQKDCIPGDLNCSCIRRNEGDFPYTGNGILVSRKKLVYECGLSCQCSPNCKNRVSQTGLKYRMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVIDRARVRWNGNNDEYVFDTTRIYQPFKWNYEPKLLEEASSNDSSEDYDIPSPVIISAKNVGNVARFMNHSCSPNVFWQPVLYEENNQPVVHISFFALRHIPPLTELTYDYGAARSDSTVGHIAPRWKKKCLCASSKCRGSFG 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3587g00022 586 MobiDBLite consensus disorder prediction 1 52 - -
Pral3587g00022 586 MobiDBLite consensus disorder prediction 33 52 - -
Pral3587g00022 586 SUPERFAMILY SET domain 311 583 IPR046341 -
Pral3587g00022 586 Pfam SET domain 422 555 IPR001214 GO:0005515
Pral3587g00022 586 Pfam Pre-SET motif 305 403 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral3587g00022 586 Pfam SAD/SRA domain 129 276 IPR003105 -
Pral3587g00022 586 Gene3D - 113 291 IPR036987 -
Pral3587g00022 586 ProSiteProfiles YDG domain profile. 130 272 IPR003105 -
Pral3587g00022 586 ProSiteProfiles Post-SET domain profile. 570 586 IPR003616 -
Pral3587g00022 586 SMART preset_2 301 395 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral3587g00022 586 SMART set_7 411 561 IPR001214 GO:0005515
Pral3587g00022 586 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 26 581 - -
Pral3587g00022 586 ProSiteProfiles Pre-SET domain profile. 347 408 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral3587g00022 586 SUPERFAMILY PUA domain-like 112 293 IPR015947 -
Pral3587g00022 586 Gene3D SET domain 293 585 IPR046341 -
Pral3587g00022 586 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 586 IPR025794 GO:0016571
Pral3587g00022 586 SMART G9a_1 125 276 IPR003105 -
Pral3587g00022 586 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 113 291 - -
Pral3587g00022 586 ProSiteProfiles SET domain profile. 411 555 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3587g00022 Pral-Chr3587 452996 464303 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3587g00022 3 586 Su(var)3-9 homologs AT5G04940 57.216 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral3587g00022 SAD_SRA 2.1e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3587g00022 K24405 - gmx:100812173 800.431