Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3586g00002 ATGTCTGGTGCAGATGTTGGCATTGCTTTTCTCTCTGCCTTCCTTCAGGTGGCTTTTGACCGGTTGGCTTCTGCAGAAACCCTTCGCTACTTCCCAAAGAGCGGATTGAATAAGACTCTGGTGAAGAAGTTGGAGAACATGCTGATATCCATCAGTAGTGTCATTGATGATGCTGAGTATAAGCAGTTCGGTGATCGAAATGTGAGGGCCTGGCTTTTTGAGCTCAAAGATGCTGTGTACGATGCTGAGGATGTCTTGGATGAGATTAACTATGAAGTCCACAAACGCAAGTTGGAAGCCGAAGCGGAAACTCAAACTAGTGTTACTAGCAAGGTACGAAAATTCTTCTCTGCTTCTGATACTATGTTTGACCAGGAAATCGAATCGAGGATGAAACAAATCCTTGAAAACCTTGCATTTCTCGAGAGCAGAAAGATTGGTCTGCATTTGAAACAATTTAACAAAGGTGGAGCTGATGGATTTGAGAGAAAGTGGCAGACTGAGACAACTTCTTTAGTGGATGAAGCTGGAATATATGGCAGGAATGAGGACAAAGAAATTATATTTCAAAGGTTGAAAAACGACAGCCACTTTTCTGTCATTTCTATAGTGGGTATGGGTGGGTTGGGGAAGACCACCCTTGCTCAGCTTGTTTATAATGATGAAAGGGTTAAGAGTGAATTTGACTATAGACTTTGGGTATGTGTTTCAGATGACTTTGATGTTTTGAGGTTGTCAAAAAGAATTTTCAAGAAAGCCACGGAATCTAATAATGACATAGAAGATTTAGATGCAGTTCAAAATAAGTTGAAGGATTTCTTCTCTAAAAAAAAGTTCCTCATTATTCTTGATGATGCTTGGTGTGATGATTGCATATCATGGGAAAAATTTTTAGCACCTTTCATATGTGGGGTTGCGGGAAGCAGAATTCTTGTCACTTCACGCGATGAGAATGTCGTGTTAGCAGCTGGCTCTAATGAAGAACATCACCTAAAGCTATTGTCACATGAAGATGGTTGGCTATTATTTAAAAAATATGCAATTCGCAACTGTTGTCCACCAACGAATTTTGATCATGAAGAAATTGGAAGAAAGATTGTTAAAAAGTGTAAAGGTTTGCCTTTGGCCTTGAAAACAATTGGGAGTCTCTTGTACAGAAAATCATCTTGGGAGGAATGGAACAACATTTTGGGAAGTGAGATATGGGAGATTTCTTATAATAATGTTCTTCCCGCTGTGATATTGAGCTATCATTATCTCCCTTCTCATCTAAAGCGATGCTTTGCTTATTGTTCATTATTCCCGAAGGATTATGAATTTCGCAAGGAGGAGCTGATTCTATTGTGGATGGCTCATAATTTCTTGCAAGCCTCTCAACCAAATAAGTCAATTGAAGAAGTAGGCAATGAATACTTCCAAGAGCTTGTGTCAAGATCTTTTTTTCAGGAGTCGTCTTCTATAAATGGAACATGTTTTGTCATGCATGACATTCTCAATGATCTGGCAATTCATGTATCTGGAGATCTTTGTTTCAAGCAAGAGGCTAAGGGGGTGGTGGATTTTTCAGAAAAAACCCGTCACTTATCTGTTTTGTATCACGGAAATGGAGAATACAAATGGTTTGAGAATTTGCAAGAAATGAAAAAATTACGAACATTCTTGCCTCTCAGAGATGGGTGGGGTTTCCTGTGGACCTCGAGCAACCTAATATTTGATGAATTATGCAAGTGCAAATGCTTGCGAGTTTTATCTCTGGCTTCCAATGACACAATTGAGGAGATACCTGATTCTATAGGAAATCTCATACATCTACGGTGTCTTGATCTATCTAACTGTAAAATTAAGAGGCTTCCCGAGTCAATATGTCTTCTGTATAACCTACAAACGTTGAAATTGGTCAACTGCAGACTTTTGGTTGAGTTGCCTGCTGATTTTCATAAATTAAAAAATTTGCGTCATCTAGATTTACGATTCACTAGCCTGAAAATGATCCCACCAAAAATGGGAGGGATGAAAAATCTCCAAGTTCGTCTGACATCATTTAAAGTGGGCAAATGTAATGAGCTCAACATCAAACAATTAGGCGAACTCAATCTTCAAGGAGAGCTTTCAATTTATGAGTTGCAGAATGTAGTTCATGGAACGGATGCCTTACAAGCCAACTTGAAAGAAAAAAGGTACCTTGAGGAGTTACGCTTCAAATGGAATGAAGACACCAGTGATGATTCTCAGAATGAGAGGGATGTGCTAGAGAAGCTCCGACCCCACCAAAATTTGAAGAAACTATCAGTCGAGAACTATGGTGGCACAAGGTTTCCAGATTGGTTTGCTGATAACACATGGTCCAACGTAGTGGAGCTCCAGTTAAACAGTTGCAAGTATTGTTTCGTGTTGCCATCGTTAGGCCTTTTGCCGTCTCTCAAGTCACTATTCATTGAAAAGTTGGACGGCATTGTGGCTATTGGTGCTGAATTTCTCGGAAGTGATTCTTCTACTGTTCCATTTAGATCTCTTGAAACCTTGGAGCTCGAGGGAATGGTGAATTGGGAGGAATGGGATTGTGCGACTGCTTCAAGGGCCTTCCCATGCCTTAAACAGCTTTGTATAAGAAAGTGTCCAAGGCTTAAAGAGAATTTGCCCGAACAACTTCTTTCTTTAACTAATCTTTTTATTCAAGATTGCCCACAACTTGTAGCTTTGGTTCCACGAGCCCCAACAATTCAATGGTTGACTCTTGAAAACTGTGGAAACATGCATTGGGAGTTCCCATTGAATCAACGTCATGACTCACTTCGTAAGATACGTATAGTTAACAGTTGTGGGTCGCTTGGGACCTTTGCATTGGATCAATTCCCTGAACTTCAGCATTTGTATTTGCGTGAGTGTAATAATCTTGAAAGGATTTCTATTTCAGATTGGTTTGCTGATAACACATGGTCCAACGTAGTGGAGCTCCGATTAGAAGGTTGCAAGTATTGTTTTGTGTTGCCATCGTTAGGCCTTTTGCCTTCTCTCAAGTCACTACTAATTGGAGAGTTGGATGGCATTGTGGCTATTGGTGCTGAATTTCTCGGAAGTGATTCTTCTACTGTCCCATTTAGATCTCTTGAAACCTTGAAGCTCGAGGGAATGGTGAATTGGGAGAAATGGGATTGTGCCACTGCTTCAAGGGCCTTCCCATGCCTTAAAGTGCTTCGTATAACAGATTGTCCAAAGCTGAAAGAGAATTTGCCCGAACAACTTCTTTCTTTAGATAATCTTGTAATTGAAGATTGCCCACAACTTGTAGCTTTGGTTCCACGAGCCCCAACAATTCAATGGTTGACTCTTGAAAACTGTGGAAACATGCATTGGGAGTTCCCATTGAATCAACGTCATGACTCACTTCGTGAGATAAGTATAGTTAAAAGTTGTGGGTCGCTTGGGATCTTCGCATTGGATCAATTCCCTGCACTTCAGTATTCGCATTTGTGTGAGTGTAATAATCTTGAAAGGATTTCTATTTCAGAGGGGCAAAACCATGGGAATCTTACAAGTTTAAGCATTAAAAAGTGTCCAAAATTCGTATCCTTTCCGAAAAAGGGGTGTTCTGCCCCTAGGCTGGAATATTGCTGCTTTGAAGATTTGGAGAATTTGAAATCACTACCTGAGCATATCAACATTTTTGCTCCGTCTCTTAGTGAACTAAGTATAACAGATTGTCCACAAATGGAATCGTTGCCAGAGGGGGGTCTGCTATCAAAACTGACGCATCTTCATATCAACAGATGCCCGAAACTGTTTGCATGTCGAATGCAATGGGGTTTGCACGATTATGATTTTCTACGTGAATTGAGCATCATAGGTGACGATGTGGTGGAGTCTCTACCTAAACCAGGACTACTCCCAACTTCTCTTACTTTTCTTCGCATCAGCAACTGTTCCAATCTCAGAATGTTGGACTACAAGGCTCTTTGTCAATCGCCCTCCCTCAAATATTTGAATATTATGAATTGTCCGAGACTCCAATGCATGCCTAAGGAGGGCCTCCCCAGTTCCCTTTCTTCCCTTCAAATTTTTGGAGCTTGTCCAACGCTTAAACAAAGATGCCAGAAACCAGACGGGGAAGATTGGGAAAAGATTGCTCACATCCCTTTTCTTTATATTGATTAG 4152 0.4058 MSGADVGIAFLSAFLQVAFDRLASAETLRYFPKSGLNKTLVKKLENMLISISSVIDDAEYKQFGDRNVRAWLFELKDAVYDAEDVLDEINYEVHKRKLEAEAETQTSVTSKVRKFFSASDTMFDQEIESRMKQILENLAFLESRKIGLHLKQFNKGGADGFERKWQTETTSLVDEAGIYGRNEDKEIIFQRLKNDSHFSVISIVGMGGLGKTTLAQLVYNDERVKSEFDYRLWVCVSDDFDVLRLSKRIFKKATESNNDIEDLDAVQNKLKDFFSKKKFLIILDDAWCDDCISWEKFLAPFICGVAGSRILVTSRDENVVLAAGSNEEHHLKLLSHEDGWLLFKKYAIRNCCPPTNFDHEEIGRKIVKKCKGLPLALKTIGSLLYRKSSWEEWNNILGSEIWEISYNNVLPAVILSYHYLPSHLKRCFAYCSLFPKDYEFRKEELILLWMAHNFLQASQPNKSIEEVGNEYFQELVSRSFFQESSSINGTCFVMHDILNDLAIHVSGDLCFKQEAKGVVDFSEKTRHLSVLYHGNGEYKWFENLQEMKKLRTFLPLRDGWGFLWTSSNLIFDELCKCKCLRVLSLASNDTIEEIPDSIGNLIHLRCLDLSNCKIKRLPESICLLYNLQTLKLVNCRLLVELPADFHKLKNLRHLDLRFTSLKMIPPKMGGMKNLQVRLTSFKVGKCNELNIKQLGELNLQGELSIYELQNVVHGTDALQANLKEKRYLEELRFKWNEDTSDDSQNERDVLEKLRPHQNLKKLSVENYGGTRFPDWFADNTWSNVVELQLNSCKYCFVLPSLGLLPSLKSLFIEKLDGIVAIGAEFLGSDSSTVPFRSLETLELEGMVNWEEWDCATASRAFPCLKQLCIRKCPRLKENLPEQLLSLTNLFIQDCPQLVALVPRAPTIQWLTLENCGNMHWEFPLNQRHDSLRKIRIVNSCGSLGTFALDQFPELQHLYLRECNNLERISISDWFADNTWSNVVELRLEGCKYCFVLPSLGLLPSLKSLLIGELDGIVAIGAEFLGSDSSTVPFRSLETLKLEGMVNWEKWDCATASRAFPCLKVLRITDCPKLKENLPEQLLSLDNLVIEDCPQLVALVPRAPTIQWLTLENCGNMHWEFPLNQRHDSLREISIVKSCGSLGIFALDQFPALQYSHLCECNNLERISISEGQNHGNLTSLSIKKCPKFVSFPKKGCSAPRLEYCCFEDLENLKSLPEHINIFAPSLSELSITDCPQMESLPEGGLLSKLTHLHINRCPKLFACRMQWGLHDYDFLRELSIIGDDVVESLPKPGLLPTSLTFLRISNCSNLRMLDYKALCQSPSLKYLNIMNCPRLQCMPKEGLPSSLSSLQIFGACPTLKQRCQKPDGEDWEKIAHIPFLYID 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3586g00002 1383 Pfam Rx N-terminal domain 10 105 IPR041118 -
Pral3586g00002 1383 PRINTS Disease resistance protein signature 599 615 - -
Pral3586g00002 1383 PRINTS Disease resistance protein signature 370 384 - -
Pral3586g00002 1383 PRINTS Disease resistance protein signature 273 287 - -
Pral3586g00002 1383 PRINTS Disease resistance protein signature 200 215 - -
Pral3586g00002 1383 PANTHER DISEASE RESISTANCE PROTEIN RP 44 881 IPR044974 GO:0006952
Pral3586g00002 1383 Gene3D - 17 128 - -
Pral3586g00002 1383 Coils Coil 124 144 - -
Pral3586g00002 1383 SMART LRR_typ_2 648 671 IPR003591 -
Pral3586g00002 1383 SMART LRR_typ_2 601 624 IPR003591 -
Pral3586g00002 1383 Pfam NB-ARC domain 183 397 IPR002182 GO:0043531
Pral3586g00002 1383 Gene3D Ribonuclease Inhibitor 1103 1378 IPR032675 -
Pral3586g00002 1383 Gene3D Ribonuclease Inhibitor 528 903 IPR032675 -
Pral3586g00002 1383 Gene3D Ribonuclease Inhibitor 904 1102 IPR032675 -
Pral3586g00002 1383 SUPERFAMILY L domain-like 1157 1375 - -
Pral3586g00002 1383 Gene3D - 333 416 IPR042197 -
Pral3586g00002 1383 Gene3D - 417 504 IPR036388 -
Pral3586g00002 1383 Gene3D - 162 329 IPR027417 -
Pral3586g00002 1383 SUPERFAMILY L domain-like 493 904 - -
Pral3586g00002 1383 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 431 IPR027417 -
Pral3586g00002 1383 FunFam Probable disease resistance protein At1g61300 162 328 - -
Pral3586g00002 1383 SUPERFAMILY RNI-like 835 1111 - -
Pral3586g00002 1383 FunFam Probable disease resistance protein At1g63360 417 504 - -
Pral3586g00002 1383 ProSiteProfiles Leucine-rich repeat profile. 603 624 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3586g00002 Pral-Chr3586 23496 27647 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3586g00002 173 387 WRKY Transcription Factor Family AT5G45050 25.455 6.45e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3586g00002 - - pcin:129315316 1191.79