Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3579g00001 | ATGTATACGAAGGAGCTTGAGGAAATGGAGAAGGTCACAAAAGAAGAGTACTTAGCTTCACTGCGACGGCAAAGCAGTGGATTTTCTAGAGGGGTTTCTAAGTATCGAGGAGTAGCTAGGCATCACCATAATGGTCGATGGGAAGCTCGGATTGGAAGAGTATTAGGCAACAAGTATCTCTACTTGGGTACATACAGTACTCAAGAGGAAGCAGCCACAGCTTACGACTTGGCAGCTATCCAATACAGAGGCGCAAATGCGGTGACCAATTTCGACATTAGCAGATACATTGACAAGATCACCCTCATCAACCAGAACAACAATGGCGAATCCCAGCAAGTTCAAACTGTAATCACAATACCATCACAAGTGGAAGAAGATGAATATGAAGAAGAAGAAGAAGAAGAAGAAGCACCTCCCCATTCATCCTCTTCCCCCTGCTCCTCCTCCGAGTCAGAAAATCTGCAGAATCAGAAGCAACCACCACAACAGCAGCTACAAGACCAAGAAATCGAACCAGAAAATCCTCAAATTCACCCTATTCAGATCTCTCCACCGAACGAAGAATCCGTTCCGATTGCTCCTGTGGAGCCTACTACGACCACCGATGAACAGGAGCTTCCATGGATATTCATGGACGACGACGGATTCTCGCAGTTTAGGGTTCCAGATCTTCCTGACGTCGACCTACTGAGCGCGTTCGGTGATGGTGCACGAAGATTCGACGACGACATTGGATTTCTATTCAGGCCAGATCCCGAGGAGGCCGATTTCAACCTGGACGCGATTTTGAGCAGCCCGAGCTGTGGAGATCTGGCGATGGCGGATTCAAGGAGGATGATGGCGGAGGATTATGATTGTGGGCAAGAGAAGAAGTTGCTATGTTCCGCAAAATCTGCTTCTTGTTCACCAAACTCTTCGATTTCTTGTTCCGATTATACTTCATGA | 948 | 0.4726 | MYTKELEEMEKVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYSTQEEAATAYDLAAIQYRGANAVTNFDISRYIDKITLINQNNNGESQQVQTVITIPSQVEEDEYEEEEEEEEAPPHSSSSPCSSSESENLQNQKQPPQQQLQDQEIEPENPQIHPIQISPPNEESVPIAPVEPTTTTDEQELPWIFMDDDGFSQFRVPDLPDVDLLSAFGDGARRFDDDIGFLFRPDPEEADFNLDAILSSPSCGDLAMADSRRMMAEDYDCGQEKKLLCSAKSASCSPNSSISCSDYTS | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3579g00001 | 315 | SMART | rav1_2 | 34 | 98 | IPR001471 | GO:0003700|GO:0006355 | |
Pral3579g00001 | 315 | MobiDBLite | consensus disorder prediction | 124 | 207 | - | - | |
Pral3579g00001 | 315 | CDD | AP2 | 33 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Pral3579g00001 | 315 | MobiDBLite | consensus disorder prediction | 124 | 138 | - | - | |
Pral3579g00001 | 315 | FunFam | AP2-like ethylene-responsive transcription factor | 33 | 94 | - | - | |
Pral3579g00001 | 315 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 2 | 164 | - | - | |
Pral3579g00001 | 315 | PRINTS | Ethylene responsive element binding protein signature | 74 | 94 | IPR001471 | GO:0003700|GO:0006355 | |
Pral3579g00001 | 315 | PRINTS | Ethylene responsive element binding protein signature | 35 | 46 | IPR001471 | GO:0003700|GO:0006355 | |
Pral3579g00001 | 315 | Pfam | AP2 domain | 33 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Pral3579g00001 | 315 | Gene3D | AP2/ERF domain | 33 | 94 | IPR036955 | GO:0003700|GO:0006355 | |
Pral3579g00001 | 315 | ProSiteProfiles | AP2/ERF domain profile. | 34 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Pral3579g00001 | 315 | SUPERFAMILY | DNA-binding domain | 33 | 94 | IPR016177 | GO:0003677 | |
Pral3579g00001 | 315 | MobiDBLite | consensus disorder prediction | 141 | 172 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3579g00001 | Pral-Chr3579 | 27594 | 35299 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3579g00001 | 2 | 249 | AP2-EREBP Transcription Factor Family | AT3G54320 | 49.621 | 2.20e-55 | 182 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral3579g00001 | AP2 | 3.4e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3579g00001 | - | - | pcin:129314889 | 407.912 |