Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3577g00042 ATGGCTGCGGAATTTGTTGGTGGTGCTGTTTTGTCTTTCTTCCTTCAAATGGCTTTCGACCGGTTGGCTTCTGGTGAAACTCTTCACTACTTTCAAAAGATTGGATTGAATGAGACTCTGACTGGCTTCTCTGTTTGCTCTCATCGATCCCTTGCTCTTCTTGATCATTTTCTTCTTCCTACCATGTCTGGTGCAGATGTTGGCATTGCCTTTATGTCTGCCTTCCTTCAGGTGGCTTTTGACCGGTTGGCTACTGGAGAAACTCTTCGCTACTTCCAAAAGAGAGGATTGAATGAGACACTGGTGAAGAAATTGAAGATCATGCTAATATCTGTGAACAGTGTAATTGATGATGCTGAGTATAAGCAGTTTAGTGATCCAAATGTGAGGGCCTGGCTTTTGGAGCTCAAAGACGCTGTGTACGATGCTGAGGATGTCTTGGATGAGATTAGCTATGAACTCTACAAACGCAAGTTGGAAGCCGAAGCTGAACCTCAAACTAGTGTTACTAGCAAGGTACGCAAATTCTTCAATGCTTCTGCTACTTCATTTGACCAGGAAATTGAATCAAGGATGAAACAAGTCCTTGAAAGCCTTGAATTTCTTGAGAGCAGAAGGATTGGTTTGGGATTAAACAAAGGTAAAGATGGTGCTGTTGGGTCTGTCACAAAGCTGCCGACAACTTCTTTGGTGGATGAAGTTGGAATATGTGGAAGGGATAAAGACAAAGATATCATCATTAAGCAGTTGCAAAATGACGGTCACTTTTCTGTGATCTCTATAGTCGGTATGGGTGGATTGGGCAAGACTACCCTTGCTCAGCTTGTTTATAATGATAAAAGGGTTAAGAGTGAATTTGACCTCAGACTTTGGGTTTGTGTTTCTGATGACTTTGATGTTTTGAAGTTAACAAAAATAATTTTCAAGAAAATCATGGCATCTAACGATGGGACAGAAGATTTAGATGCACTTCAAAATAAGTTGAAGGATTGGTCGTCTAAAAAAAAAATTCTTATTGTTCTTGATGATGTTTGGTGTGATGATTACGTATTATGGGAAGCTTTTTTAGCACCTTTCATAGGTGGGATTGTGGGAAGCAGAATTCTTGTTACTTCACGCAATGAGAAAGTTGCCTTAGCCTTCCCCTCTGATGAAATATATCACCCAAATCACTTGTCAGATGAAGATGGTTGGTTGTTATTTACAAAGTATGCATTTCGCAACTATTGTCCACCAACGAATTTTAATCATGAAGAAATTGGAAGAAAGATTGTTAAAAAGTGCAAAGGTTTGCCTTTGGCCTTGAAAACAATTGGGAGTCTCTTGTACAGGAAATCATCTTGGGAAGAATGGAACAACATTTTGAGAAGTGAGATATGGAACATTTCTTATAATAATATTCTTCCTGCTTTGATATTGAGCTATCATTATCTCCCTTCTCATCTAAAGCGATGCTTTGCTTATTGTTCATTATTCCCAAAGGATTATGAATTTGGCAAGAAGGAGTTAATTCTATTGTGGATGGCTCATAATTTCTTACAAGCCTCTCAATCAAATAAGTCAATTGAAGAAGTAGGCAACGAATACTTCCAAGAGCTTGTGTCAAGATCCTTTTTTCAGAAGTCTTCTGGAAATGAAGCATATTTTGTCATGCATGACATTCTCAATGATTTGGCAAATTTTGTATCTGGTGAGCTTTGTTTCAAGCAAGAGGTTAAAGAGGTGGCATATAATTTAGAAAAAACCCGTCACTTATCTTTTTTGTGTCATGAATACAGAGAATATAGATGGTTGAGAATTTGCAAAAAATAA 1812 0.3825 MAAEFVGGAVLSFFLQMAFDRLASGETLHYFQKIGLNETLTGFSVCSHRSLALLDHFLLPTMSGADVGIAFMSAFLQVAFDRLATGETLRYFQKRGLNETLVKKLKIMLISVNSVIDDAEYKQFSDPNVRAWLLELKDAVYDAEDVLDEISYELYKRKLEAEAEPQTSVTSKVRKFFNASATSFDQEIESRMKQVLESLEFLESRRIGLGLNKGKDGAVGSVTKLPTTSLVDEVGICGRDKDKDIIIKQLQNDGHFSVISIVGMGGLGKTTLAQLVYNDKRVKSEFDLRLWVCVSDDFDVLKLTKIIFKKIMASNDGTEDLDALQNKLKDWSSKKKILIVLDDVWCDDYVLWEAFLAPFIGGIVGSRILVTSRNEKVALAFPSDEIYHPNHLSDEDGWLLFTKYAFRNYCPPTNFNHEEIGRKIVKKCKGLPLALKTIGSLLYRKSSWEEWNNILRSEIWNISYNNILPALILSYHYLPSHLKRCFAYCSLFPKDYEFGKKELILLWMAHNFLQASQSNKSIEEVGNEYFQELVSRSFFQKSSGNEAYFVMHDILNDLANFVSGELCFKQEVKEVAYNLEKTRHLSFLCHEYREYRWLRICKK 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3577g00042 603 Gene3D - 474 561 IPR036388 -
Pral3577g00042 603 PANTHER DISEASE RESISTANCE PROTEIN RP 130 590 IPR044974 GO:0006952
Pral3577g00042 603 Gene3D - 391 473 IPR042197 -
Pral3577g00042 603 FunFam Probable disease resistance protein At1g63360 475 561 - -
Pral3577g00042 603 Pfam NB-ARC domain 240 475 IPR002182 GO:0043531
Pral3577g00042 603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 225 489 IPR027417 -
Pral3577g00042 603 PRINTS Disease resistance protein signature 331 345 - -
Pral3577g00042 603 PRINTS Disease resistance protein signature 428 442 - -
Pral3577g00042 603 PRINTS Disease resistance protein signature 258 273 - -
Pral3577g00042 603 Pfam Rx N-terminal domain 71 166 IPR041118 -
Pral3577g00042 603 FunFam Probable disease resistance protein At1g61300 222 385 - -
Pral3577g00042 603 Gene3D - 221 384 IPR027417 -
Pral3577g00042 603 Gene3D - 81 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3577g00042 Pral-Chr3577 691137 693512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3577g00042 259 450 WRKY Transcription Factor Family AT5G45050 28.571 1.91e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3577g00042 - - pcin:129315316 751.895