Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3577g00039 ATGATGGACGGAGTCCGAGGTGAACGAGATGAATTCAAGAAGTCTCCATCGCTGCATTCCTCACCTTCAGCTGTTGCTGTAGCCATCAGGGGTAACAAGAAAAGCAAGCATGTGGTACAATGGGCACTGGATAAATTTGTTCCCGAGGGAAGAATTATGTTTAAGCTGATACATGTCCATTCTGCTGCTTTTAAGAAGGAAATGGAGTGGCAGACAAGTGTAATGCTCCTACCTTACAAGAAAATGTGTGAGCAGAGAAAGGTTCATGTTGATGTTGTAGTGATTCAATCTGATGATATAGAAACTGCAATAGCAGAGGAAGTTGCTAGAGGTTCTATAACCGACCTGGTTATAGGGGCTTCATCTCATGCCATATTTACTAGTAAACTGAAGGGTTTGTCTGCAAAAATCTCGTCATGCGCTCCAAGATTTTGCACAGTTTATGCTGTTTCCAAAGGTAGACTGTTTTCTTCACGGCCATCAGACATAGAGATTGATGGAAGCTTAATAGATGACAGCAGTGAAACCAGTTGTTCAACCAATAGCTCATTGAACTCTGCATCCACCTCTCAGATAGACTATGGCTCAGTCAGATCATATGCTCCGACACATTCCTCTTCCCTAGCGGCACAGAGATATCAAGCTCTTTCAACCATTAATCTGACCCGTCAGAGCGCAAAATCTGGTTCAATTGAAAATAACCACTCTAGAAGCCATTCTCTAGACCTTGGCATAGAGCAAACTGCTATATATTCTTCTTCCAAAAACTCAGATATTGACAATGCTTTGAGCCGGGCCTCTAGCTGCAAAAGCAATCTGTCAGATGGTGAATCTTGGAATTATTATCAAAATCCCACCATGGATGCACCACTGGCAACGGTGTCGCCTGATAAGCAGGAAAATTTTTACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGGAATGCCCAAGGAATGCACGTGGTGGCTCAAAGTCAGAATATTTATGCATCACAAATGCTGAACAATCTCAGTAAGAAGAGAACAGGGGAATCTATGAAATTGAAGGGAATTATTGCTAAGGAGAACATGGCCAAAAAATTAATAATAAAGGAGAGAGAGAAATGTGAGGCAGCAGAAAGAGAAGCTGCTTATTTGAAAAGAAGTGCTGAAGAGGAAGCCATTGAAAGAATAGAAGCAGAGAAAAAAGCTGTCGAAGCTGCCAAAAGGAATGAAAATCTAGAGGATGCTCTCAGTGGTTCCACGCCTCATTATAAGAAGATTGCATGGGATGAAATAGTTTCAGCCACCTCATCATTTTCTGAAGAGCTTAGAATTGGAAAGGGAGCTTGTGGAACAGTGTACAGGTGCCATCTGTATCATACTTCTGTGGCGGTAAAAATTCTCCACTCTAATGAGGACCACATTATCAAGCAACTCCAGCAAGAGCTAGAAATACTGAGCAGAATTCGTCATCCAAATTTACTTCTCCTTCTTGGGGCATGCCCTGATCATGGATGCCTTGTGTATGAATACATGGAGAATGGTAGCTTAGAGGACAATTTACTCGGAAATAGATGTAATATCTCGATTCCATGGTTCAAGAGGTACAAAATTGCATGGGAAATAGCCTCTGTTCTTGCCTTTCTTCATAGCTCGAAGCCCAAACCTATCATCCATCGTGATCTGAAACCTGCGAACATCTTGCTAGATGAAAATCTTGTGAGCAAGATTGGCGATATTGGCCTTTCTACATTACTCCATTCAGATACTTTGTCTACAACATTCAAGGACACAGACCCTGTTGGGACGCTCTCCTACATAGATCCTGAGTACCAAAGGACAGGGTCAATATCTCCCAAATCTGATGTTTATGCTTTTGGAATGGTGATCCTCCAATTGTTAACTGCAAAACCAGCTAGAGCACTGGCTCATTTAGTAGAAACAGCAATTGACAAGGGAAACTTAGCAGAAGTGTTGGATCCCAAAGCAGGGAGTTGGCCACTTCAGGAGACTTTGGACTTAGCTCGATTAGGCCTAAGCTGCGCAGAACTTCGGCGTAGAGACAGGCCTGATTTGAAAGATCATGTACTCCCCATGCTGGAGAGATTAAAAGAAGTCGCTGATAAGGCTCAGCATTCTGCCACAATTATTACTGTTAAATCGAGACCTCCTAATCACTTTATCTGCCCAATACTTCAGGACGTGATGGATAATCCTTGTGTTGCTGCTGATGGTTATACTTATGATTACAAAGCAATTGTAACATGGCTGCAAAGAAATGACAAATCACCAATGACAAATATGCCATTGCCTCATAAGAATCTGATTCCGAATTACACGCTTCTATCTGCTATTATGGAGTGGAAATCCAAAGAAAACTGA 2364 0.4196 MMDGVRGERDEFKKSPSLHSSPSAVAVAIRGNKKSKHVVQWALDKFVPEGRIMFKLIHVHSAAFKKEMEWQTSVMLLPYKKMCEQRKVHVDVVVIQSDDIETAIAEEVARGSITDLVIGASSHAIFTSKLKGLSAKISSCAPRFCTVYAVSKGRLFSSRPSDIEIDGSLIDDSSETSCSTNSSLNSASTSQIDYGSVRSYAPTHSSSLAAQRYQALSTINLTRQSAKSGSIENNHSRSHSLDLGIEQTAIYSSSKNSDIDNALSRASSCKSNLSDGESWNYYQNPTMDAPLATVSPDKQENFYLELEKLRIELRNAQGMHVVAQSQNIYASQMLNNLSKKRTGESMKLKGIIAKENMAKKLIIKEREKCEAAEREAAYLKRSAEEEAIERIEAEKKAVEAAKRNENLEDALSGSTPHYKKIAWDEIVSATSSFSEELRIGKGACGTVYRCHLYHTSVAVKILHSNEDHIIKQLQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDNLLGNRCNISIPWFKRYKIAWEIASVLAFLHSSKPKPIIHRDLKPANILLDENLVSKIGDIGLSTLLHSDTLSTTFKDTDPVGTLSYIDPEYQRTGSISPKSDVYAFGMVILQLLTAKPARALAHLVETAIDKGNLAEVLDPKAGSWPLQETLDLARLGLSCAELRRRDRPDLKDHVLPMLERLKEVADKAQHSATIITVKSRPPNHFICPILQDVMDNPCVAADGYTYDYKAIVTWLQRNDKSPMTNMPLPHKNLIPNYTLLSAIMEWKSKEN 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3577g00039 787 Pfam Protein kinase domain 435 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3577g00039 787 PANTHER OS02G0152300 PROTEIN 25 781 - -
Pral3577g00039 787 ProSiteProfiles U-box domain profile. 716 787 IPR003613 GO:0004842|GO:0016567
Pral3577g00039 787 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 132 - -
Pral3577g00039 787 SUPERFAMILY RING/U-box 715 785 - -
Pral3577g00039 787 SMART Ubox_2 720 782 IPR003613 GO:0004842|GO:0016567
Pral3577g00039 787 Gene3D Phosphorylase Kinase; domain 1 411 505 - -
Pral3577g00039 787 CDD RING-Ubox_WDSUB1-like 718 772 - -
Pral3577g00039 787 SUPERFAMILY Protein kinase-like (PK-like) 416 688 IPR011009 -
Pral3577g00039 787 Gene3D Transferase(Phosphotransferase) domain 1 506 716 - -
Pral3577g00039 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672|GO:0006468
Pral3577g00039 787 SMART serkin_6 433 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3577g00039 787 Pfam U-box domain 718 785 IPR003613 GO:0004842|GO:0016567
Pral3577g00039 787 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 717 787 IPR013083 -
Pral3577g00039 787 CDD STK_N 25 153 - -
Pral3577g00039 787 Coils Coil 374 410 - -
Pral3577g00039 787 ProSiteProfiles Protein kinase domain profile. 433 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3577g00039 Pral-Chr3577 679071 686185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3577g00039 25 784 U-box Gene Family AT4G25160 47.101 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral3577g00039 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3577g00039 - - gmx:100818628 1013.83