Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3577g00037 ATGTTCATGGTTTCTGGGTTCAACAGAGCTGGCTTCTTGTTTGGCGTCTATGACAACTTTCAATTTGGTGTTCCAAGATGCAAAGAAAGAGTGATGATGGACGGAGTCCGAGGTGAACGAGATGAATTCAAGAAGTCTCCATCGCTGCATTCCTCACCTTCAGCTGTTGCTGTAGCCATCAGGGGTAACAAGAAAAGCAAGCATGTGGTACAATGGGCACTGGATAAATTTGTTCCCGAGGGAAGAATTATGTTTAAGCTGATACATGTCCATTCTGCTGCTTTTAAGAAGGAAATGGAGTGGCAGACAAGTGTAATGCTCCTACCTTACAAGAAAATGTGTGAGCAGAGAAAGGTTCATGTTGATGTTGTAGTGATTCAATCTGATGATATAGAAACTGCAATAGCAGAGGAAGTTGCTAGAGGTTCTATAACCGACCTGGTTATAGGGGCTTCATCTCATGCCATATTTACTAGTAAACTGAAGGGTTTGTCTGCAAAAATCTCGTCATGCGCTCCAAGATTTTGCACAGTTTATGCTGTTTCCAAAGGTAGACTGTTTTCTTCACGGCCATCAGACATAGAGATTGATGGAAGCTTAATAGATGACAGCAGTGAAACCAGTTGTTCAACCAATAGCTCATTGAACTCTGCATCCACCTCTCAGATAGACTATGGCTCAGTCAGATCATATGCTCCGACACATTCCTCTTCCCTAGCGGCACAGAGATATCAAGCTCTTTCAACCATTAATCTGACCCGTCAGAGCGCAAAATCTGGTTCAATTGAAAATAACCACTCTAGAAGCCATTCTCTAGACCTTGGCATAGAGCAAACTGCTATATATTCTTCTTCCAAAAACTCAGATATTGACAATGCTTTGAGCCGGGCCTCTAGCTGCAAAAGCAATCTGTCAGATGGTGAATCTTGGAATTATTATCAAAATCCCACCATGGATGCACCACTGGCAACGGTGTCGCCTGATAAGCAGGAAAATTTTTACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGGAATGCCCAAGGAATGCACGTGGTGGCTCAAAGTCAGAATATTTATGCATCACAAATGCTGAACAATCTCAGTAAGAAGAGAACAGGGGAATCTATGAAATTGAAGGGAATTATTGCTAAGGAGAACATGGCCAAAAAATTAATAATAAAGGAGAGAGAGAAATGTGAGGCAGCAGAAAGAGAAGCTGCTTATTTGAAAAGAAGTGCTGAAGAGGAAGCCATTGAAAGAATAGAAGCAGAGAAAAAAGCTGTCGAAGCTGCCAAAAGGAATGAAAATCTAGAGGATGCTCTCAGTGGTTCCACGCCTCATTATAAGAAGATTGCATGGGATGAAATAGTTTCAGCCACCTCATCATTTTCTGAAGAGCTTAGAATTGGAAAGGGAGCTTGTGGAACAGTGTACAGGTGCCATCTGTATCATACTTCTGTGGCGGTAAAAATTCTCCACTCTAATGAGGACCACATTATCAAGCAACTCCAGCAAGAGCTAGAAATACTGAGCAGAATTCGTCATCCAAATTTACTTCTCCTTCTTGGGGCATGCCCTGATCATGGATGCCTTGTGTATGAATACATGGAGAATGGTAGCTTAGAGGACAATTTACTCGGAAATAGATGTAATATCTCGATTCCATGGTTCAAGAGGTACAAAATTGCATGGGAAATAGCCTCTGTTCTTGCCTTTCTTCATAGCTCGAAGCCCAAACCTATCATCCATCGTGATCTGAAACCTGCGAACATCTTGCTAGATGAAAATCTTGTGAGCAAGATTGGCGATATTGGCCTTTCTACATTACTCCATTCAGATACTTTGTCTACAACATTCAAGGACACAGACCCTGTTGGGACGCTCTCCTACATAGATCCTGAGTACCAAAGGACAGGGTCAATATCTCCCAAATCTGATGTTTATGCTTTTGGAATGGTGATCCTCCAATTGTTAACTGCAAAACCAGCTAGAGCACTGGCTCATTTAGTAGAAACAGCAATTGACAAGGGAAACTTAGCAGAAGTGTTGGATCCCAAAGCAGGGAGTTGGCCACTTCAGGAGACTTTGGACTTAGCTCGATTAGGCCTAAGCTGCGCAGAACTTCGGCGTAGAGACAGGCCTGATTTGAAAGATCATGTACTCCCCATGCTGGAGAGATTAAAAGAAGTCGCTGATAAGGCTCAGCATTCTGCCACAATTATTACTGTTAAATCGAGACCTCCTAATCACTTTATCTGCCCAATACTTCAGGACGTGATGGATAATCCTTGTGTTGCTGCTGATGGTTATACTTATGATTACAAAGCAATTGTAACATGGCTGCAAAGAAATGACAAATCACCAATGACAAATATGCCATTGCCTCATAAGAATCTGATTCCGAATTACACGCTTCTATCTGCTATTATGGAGTGGAAATCCAAAGAAAACTGA 2457 0.4196 MFMVSGFNRAGFLFGVYDNFQFGVPRCKERVMMDGVRGERDEFKKSPSLHSSPSAVAVAIRGNKKSKHVVQWALDKFVPEGRIMFKLIHVHSAAFKKEMEWQTSVMLLPYKKMCEQRKVHVDVVVIQSDDIETAIAEEVARGSITDLVIGASSHAIFTSKLKGLSAKISSCAPRFCTVYAVSKGRLFSSRPSDIEIDGSLIDDSSETSCSTNSSLNSASTSQIDYGSVRSYAPTHSSSLAAQRYQALSTINLTRQSAKSGSIENNHSRSHSLDLGIEQTAIYSSSKNSDIDNALSRASSCKSNLSDGESWNYYQNPTMDAPLATVSPDKQENFYLELEKLRIELRNAQGMHVVAQSQNIYASQMLNNLSKKRTGESMKLKGIIAKENMAKKLIIKEREKCEAAEREAAYLKRSAEEEAIERIEAEKKAVEAAKRNENLEDALSGSTPHYKKIAWDEIVSATSSFSEELRIGKGACGTVYRCHLYHTSVAVKILHSNEDHIIKQLQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDNLLGNRCNISIPWFKRYKIAWEIASVLAFLHSSKPKPIIHRDLKPANILLDENLVSKIGDIGLSTLLHSDTLSTTFKDTDPVGTLSYIDPEYQRTGSISPKSDVYAFGMVILQLLTAKPARALAHLVETAIDKGNLAEVLDPKAGSWPLQETLDLARLGLSCAELRRRDRPDLKDHVLPMLERLKEVADKAQHSATIITVKSRPPNHFICPILQDVMDNPCVAADGYTYDYKAIVTWLQRNDKSPMTNMPLPHKNLIPNYTLLSAIMEWKSKEN 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3577g00037 818 CDD RING-Ubox_WDSUB1-like 749 803 - -
Pral3577g00037 818 SUPERFAMILY RING/U-box 746 816 - -
Pral3577g00037 818 PANTHER OS02G0152300 PROTEIN 56 812 - -
Pral3577g00037 818 SUPERFAMILY Protein kinase-like (PK-like) 447 719 IPR011009 -
Pral3577g00037 818 Coils Coil 405 441 - -
Pral3577g00037 818 CDD STK_N 56 184 - -
Pral3577g00037 818 ProSiteProfiles U-box domain profile. 747 818 IPR003613 GO:0004842|GO:0016567
Pral3577g00037 818 Pfam Protein kinase domain 466 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3577g00037 818 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 56 163 - -
Pral3577g00037 818 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 748 818 IPR013083 -
Pral3577g00037 818 Pfam U-box domain 749 816 IPR003613 GO:0004842|GO:0016567
Pral3577g00037 818 ProSiteProfiles Protein kinase domain profile. 464 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3577g00037 818 SMART serkin_6 464 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3577g00037 818 SMART Ubox_2 751 813 IPR003613 GO:0004842|GO:0016567
Pral3577g00037 818 Gene3D Phosphorylase Kinase; domain 1 442 536 - -
Pral3577g00037 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Pral3577g00037 818 Gene3D Transferase(Phosphotransferase) domain 1 537 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3577g00037 Pral-Chr3577 679071 686185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3577g00037 56 815 U-box Gene Family AT4G25160 47.101 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral3577g00037 Pkinase 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3577g00037 - - gmx:100818628 1013.83