Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3577g00034 ATGTTCATGGTTTCTGGGTTCAACAGAGCTGGCTTCTTGTTTGGCGTCTATGACAACTTTCAATTTGGTGTTCCAAGATGCAAAGAAAGAGTGATGATGGACGGAGTCCGAGGTGAACGAGATGAATTCAAGAAGTCTCCATCGCTGCATTCCTCACCTTCAGCTGTTGCTGTAGCCATCAGGGGTAACAAGAAAAGCAAGCATGTGGTACAATGGGCACTGGATAAATTTGTTCCCGAGGGAAGAATTATGTTTAAGCTGATACATGTCCATTCTGCAGCTGCTTTTAAGAAGGAAATGGAGTGGCAGACAAGTGTAATGCTCCTACCTTACAAGAAAATGTGTGAGCAGAGAAAGGTTCATGTTGATGTTGTAGTGATTCAATCTGATGATATAGAAACTGCAATAGCAGAGGAAGTTGCTAGAGGTTCTATAACCGACCTGGTTATAGGGGCTTCATCTCATGCCATATTTACTAGTAAACTGAAGGGTTTGTCTGCAAAAATCTCGTCATGCGCTCCAAGATTTTGCACAGTTTATGCTGTTTCCAAAGGTAGACTGTTTTCTTCACGGCCATCAGACATAGAGATTGATGGAAGCTTAATAGATGACAGCAGTGAAACCAGTTGTTCAACCAATAGCTCATTGAACTCTGCATCCACCTCTCAGATAGACTATGGCTCAGTCAGATCATATGCTCCGACACATTCCTCTTCCCTAGCGGCACAGAGATATCAAGCTCTTTCAACCATTAATCTGACCCGTCAGAGCGCAAAATCTGGTTCAATTGAAAATAACCACTCTAGAAGCCATTCTCTAGACCTTGGCATAGAGCAAACTGCTATATATTCTTCTTCCAAAAACTCAGATATTGACAATGCTTTGAGCCGGGCCTCTAGCTGCAAAAGCAATCTGTCAGATGGTGAATCTTGGAATTATTATCAAAATCCCACCATGGATGCACCACTGGCAACGGTGTCGCCTGATAAGCAGGAAAATTTTTACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGGAATGCCCAAGGAATGCACGTGGTGGCTCAAAGTCAGAATATTTATGCATCACAAATGCTGAACAATCTCAGTAAGAAGAGAACAGGGGAATCTATGAAATTGAAGGGAATTATTGCTAAGGAGAACATGGCCAAAAAATTAATAATAAAGGAGAGAGAGAAATGTGAGGCAGCAGAAAGAGAAGCTGCTTATTTGAAAAGAAGTGCTGAAGAGGAAGCCATTGAAAGAATAGAAGCAGAGAAAAAAGCTGTCGAAGCTGCCAAAAGGAATGAAAATCTAGAGGATGCTCTCAGTGGTTCCACGCCTCATTATAAGAAGATTGCATGGGATGAAATAGTTTCAGCCACCTCATCATTTTCTGAAGAGCTTAGAATTGGAAAGGGAGCTTGTGGAACAGTGTACAGGTGCCATCTGTATCATACTTCTGTGGCGGTAAAAATTCTCCACTCTAATGAGGACCACATTATCAAGCAACTCCAGCAAGAGCTAGAAATACTGAGCAGAATTCGTCATCCAAATTTACTTCTCCTTCTTGGGGCATGCCCTGATCATGGATGCCTTGTGTATGAATACATGGAGAATGGTAGCTTAGAGGACAATTTACTCGGAAATAGATGTAATATCTCGATTCCATGGTTCAAGAGGTACAAAATTGCATGGGAAATAGCCTCTGTTCTTGCCTTTCTTCATAGCTCGAAGCCCAAACCTATCATCCATCGTGATCTGAAACCTGCGAACATCTTGCTAGATGAAAATCTTGTGAGCAAGATTGGCGATATTGGCCTTTCTACATTACTCCATTCAGATACTTTGTCTACAACATTCAAGGACACAGACCCTGTTGGGACGCTCTCCTACATAGATCCTGAGTACCAAAGGACAGGGTCAATATCTCCCAAATCTGATGTTTATGCTTTTGGAATGGTGATCCTCCAATTGTTAACTGCAAAACCAGCTAGAGCACTGGCTCATTTAGTAGAAACAGCAATTGACAAGGGAAACTTAGCAGAAGTGTTGGATCCCAAAGCAGGGAGTTGGCCACTTCAGGAGACTTTGGACTTAGCTCGATTAGGCCTAAGCTGCGCAGAACTTCGGCGTAGAGACAGGCCTGATTTGAAAGATCATGTACTCCCCATGCTGGAGAGATTAAAAGAAGTCGCTGATAAGGCTCAGCATTCTGCCACAATTATTACTGTTAAATCGAGACCTCCTAATCACTTTATCTGCCCAATACTTCAGGACGTGATGGATAATCCTTGTGTTGCTGCTGATGGTTATACTTATGATTACAAAGCAATTGTAACATGGCTGCAAAGAAATGACAAATCACCAATGACAAATATGCCATTGCCTCATAAGAATCTGATTCCGAATTACACGCTTCTATCTGCTATTATGGAGTGGAAATCCAAAGAAAACTGA 2460 0.4199 MFMVSGFNRAGFLFGVYDNFQFGVPRCKERVMMDGVRGERDEFKKSPSLHSSPSAVAVAIRGNKKSKHVVQWALDKFVPEGRIMFKLIHVHSAAAFKKEMEWQTSVMLLPYKKMCEQRKVHVDVVVIQSDDIETAIAEEVARGSITDLVIGASSHAIFTSKLKGLSAKISSCAPRFCTVYAVSKGRLFSSRPSDIEIDGSLIDDSSETSCSTNSSLNSASTSQIDYGSVRSYAPTHSSSLAAQRYQALSTINLTRQSAKSGSIENNHSRSHSLDLGIEQTAIYSSSKNSDIDNALSRASSCKSNLSDGESWNYYQNPTMDAPLATVSPDKQENFYLELEKLRIELRNAQGMHVVAQSQNIYASQMLNNLSKKRTGESMKLKGIIAKENMAKKLIIKEREKCEAAEREAAYLKRSAEEEAIERIEAEKKAVEAAKRNENLEDALSGSTPHYKKIAWDEIVSATSSFSEELRIGKGACGTVYRCHLYHTSVAVKILHSNEDHIIKQLQQELEILSRIRHPNLLLLLGACPDHGCLVYEYMENGSLEDNLLGNRCNISIPWFKRYKIAWEIASVLAFLHSSKPKPIIHRDLKPANILLDENLVSKIGDIGLSTLLHSDTLSTTFKDTDPVGTLSYIDPEYQRTGSISPKSDVYAFGMVILQLLTAKPARALAHLVETAIDKGNLAEVLDPKAGSWPLQETLDLARLGLSCAELRRRDRPDLKDHVLPMLERLKEVADKAQHSATIITVKSRPPNHFICPILQDVMDNPCVAADGYTYDYKAIVTWLQRNDKSPMTNMPLPHKNLIPNYTLLSAIMEWKSKEN 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3577g00034 819 SMART serkin_6 465 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3577g00034 819 SUPERFAMILY RING/U-box 747 817 - -
Pral3577g00034 819 Pfam Protein kinase domain 467 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3577g00034 819 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 56 164 - -
Pral3577g00034 819 SUPERFAMILY Protein kinase-like (PK-like) 448 720 IPR011009 -
Pral3577g00034 819 Gene3D Phosphorylase Kinase; domain 1 443 537 - -
Pral3577g00034 819 CDD RING-Ubox_WDSUB1-like 750 804 - -
Pral3577g00034 819 PANTHER OS02G0152300 PROTEIN 56 813 - -
Pral3577g00034 819 Gene3D Transferase(Phosphotransferase) domain 1 538 748 - -
Pral3577g00034 819 Pfam U-box domain 750 817 IPR003613 GO:0004842|GO:0016567
Pral3577g00034 819 ProSiteProfiles Protein kinase domain profile. 465 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3577g00034 819 SMART Ubox_2 752 814 IPR003613 GO:0004842|GO:0016567
Pral3577g00034 819 ProSiteProfiles U-box domain profile. 748 819 IPR003613 GO:0004842|GO:0016567
Pral3577g00034 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Pral3577g00034 819 CDD STK_N 56 185 - -
Pral3577g00034 819 Coils Coil 406 442 - -
Pral3577g00034 819 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 749 819 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3577g00034 Pral-Chr3577 679070 686185 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3577g00034 56 816 U-box Gene Family AT4G25160 47.101 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral3577g00034 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3577g00034 - - gmx:100818628 1015.76